RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W YDR124WQ04608 324 aa2.23□□□□□ -2.05
SEC4YFL005W YLR283WQ05867 314 aa2.23□□□□□ -2.05
SEC4YFL005W SLD7Q08457 257 aa2.23□□□□□ -2.05
SEC4YFL005W RAD10P06838 210 aa2.22□□□□□ -2.05
SEC4YFL005W YCR016WP25617 290 aaKnown RBP2.22□□□□□ -2.05
SEC4YFL005W SRB4P32569 687 aa2.22□□□□□ -2.05
SEC4YFL005W SGE1P33335 543 aa2.22□□□□□ -2.05
SEC4YFL005W MRPL39P36533 70 aa2.22□□□□□ -2.05
SEC4YFL005W SSH1P38353 490 aaKnown RBP2.22□□□□□ -2.05
SEC4YFL005W BFR1P38934 470 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SEC4YFL005W PIR5P46999 287 aa2.22□□□□□ -2.05
SEC4YFL005W HOC1P47124 396 aa2.22□□□□□ -2.05
SEC4YFL005W MDM34P53083 459 aa2.22□□□□□ -2.05
SEC4YFL005W SYF2P53277 215 aaPredicted RBP2.22□□□□□ -2.05
SEC4YFL005W SNZ2P53824 298 aa2.22□□□□□ -2.05
SEC4YFL005W SPG4Q04438 115 aa2.22□□□□□ -2.05
SEC4YFL005W SYC1Q08553 188 aaPredicted RBP2.22□□□□□ -2.05
SEC4YFL005W RUD3Q12234 484 aaKnown RBP2.22□□□□□ -2.05
SEC4YFL005W TCP1P12612 559 aaKnown RBP2.21□□□□□ -2.06
SEC4YFL005W YHB1P39676 399 aaKnown RBP2.21□□□□□ -2.06
SEC4YFL005W YJR079WP47126 109 aa2.21□□□□□ -2.06
SEC4YFL005W JHD2P47156 728 aaPredicted RBP2.21□□□□□ -2.06
SEC4YFL005W DIA1P54005 336 aa2.21□□□□□ -2.06
SEC4YFL005W GOT1Q03554 138 aa2.21□□□□□ -2.06
SEC4YFL005W YMR114CQ04471 368 aaKnown RBP2.21□□□□□ -2.06
SEC4YFL005W CLP1Q08685 445 aaPredicted RBP2.21□□□□□ -2.06
SEC4YFL005W YOR268CQ08734 132 aa2.21□□□□□ -2.06
SEC4YFL005W YPR011CQ12251 326 aa2.21□□□□□ -2.06
SEC4YFL005W GEP5Q12393 293 aa2.21□□□□□ -2.06
SEC4YFL005W EMP46Q12396 444 aa2.21□□□□□ -2.06
SEC4YFL005W DPM1P14020 267 aaKnown RBP2.2□□□□□ -2.06
SEC4YFL005W NTG1P31378 399 aa2.2□□□□□ -2.06
SEC4YFL005W YKL075CP36083 450 aa2.2□□□□□ -2.06
SEC4YFL005W LDB7P38210 180 aa2.2□□□□□ -2.06
SEC4YFL005W YER085CP40058 173 aa2.2□□□□□ -2.06
SEC4YFL005W YER189WP40104 122 aa2.2□□□□□ -2.06
SEC4YFL005W YGL034CP53186 121 aa2.2□□□□□ -2.06
SEC4YFL005W RHO3Q00245 231 aaKnown RBP2.2□□□□□ -2.06
SEC4YFL005W MYO5Q04439 1219 aaKnown RBP2.2□□□□□ -2.06
SEC4YFL005W RNH1Q04740 348 aa2.2□□□□□ -2.06
SEC4YFL005W RRP40Q08285 240 aaKnown RBP2.2□□□□□ -2.06
SEC4YFL005W RPO26P20435 155 aa2.19□□□□□ -2.06
SEC4YFL005W UTR5P32630 166 aa2.19□□□□□ -2.06
SEC4YFL005W MSN4P33749 630 aa2.19□□□□□ -2.06
SEC4YFL005W YHR127WP38833 243 aaKnown RBP2.19□□□□□ -2.06
SEC4YFL005W YER188WP40103 239 aa2.19□□□□□ -2.06
SEC4YFL005W GON7P46984 123 aa2.19□□□□□ -2.06
SEC4YFL005W TIM11P81449 96 aaPredicted RBP2.19□□□□□ -2.06
SEC4YFL005W YOR186WQ08560 144 aa2.19□□□□□ -2.06
SEC4YFL005W MRPL25P23369 157 aa2.18□□□□□ -2.06
SEC4YFL005W RPS5P26783 225 aaKnown RBP2.18□□□□□ -2.06
SEC4YFL005W COG3P40094 801 aa2.18□□□□□ -2.06
SEC4YFL005W TIF34P40217 347 aaKnown RBP2.18□□□□□ -2.06
SEC4YFL005W SSU72P53538 206 aaPredicted RBP2.18□□□□□ -2.06
SEC4YFL005W GRH1Q04410 372 aaKnown RBP2.18□□□□□ -2.06
SEC4YFL005W SPO77Q06134 477 aa2.18□□□□□ -2.06
SEC4YFL005W CFT1Q06632 1357 aaKnown RBP2.18□□□□□ -2.06
SEC4YFL005W YLR462WO13556 202 aa2.17□□□□□ -2.06
SEC4YFL005W RPL26AP05743 127 aaKnown RBP2.17□□□□□ -2.06
SEC4YFL005W SGA1P08019 549 aa2.17□□□□□ -2.06
SEC4YFL005W MATALPHA1P0CY06 175 aa2.17□□□□□ -2.06
SEC4YFL005W HMLALPHA1P0CY07 175 aa2.17□□□□□ -2.06
SEC4YFL005W SEC22P22214 214 aa2.17□□□□□ -2.06
SEC4YFL005W RCN1P36054 211 aa2.17□□□□□ -2.06
SEC4YFL005W YEL075CP39972 122 aa2.17□□□□□ -2.06
SEC4YFL005W OST2P46964 130 aa2.17□□□□□ -2.06
SEC4YFL005W YJL016WP47072 561 aa2.17□□□□□ -2.06
SEC4YFL005W CGR1P53188 120 aa2.17□□□□□ -2.06
SEC4YFL005W RPL26BP53221 127 aaKnown RBP2.17□□□□□ -2.06
SEC4YFL005W NOP13P53883 403 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
SEC4YFL005W YNL046WP53956 172 aa2.17□□□□□ -2.06
SEC4YFL005W MIX17Q03667 156 aa2.17□□□□□ -2.06
SEC4YFL005W SEI1Q06058 285 aa2.17□□□□□ -2.06
SEC4YFL005W SWI1P09547 1314 aa2.17□□□□□ -2.06
SEC4YFL005W YCR102CP25608 368 aa2.16□□□□□ -2.06
SEC4YFL005W CUE1P38428 203 aa2.16□□□□□ -2.06
SEC4YFL005W YGP1P38616 354 aaKnown RBP2.16□□□□□ -2.06
SEC4YFL005W COS8P38723 381 aa2.16□□□□□ -2.06
SEC4YFL005W TCD1P38756 429 aa2.16□□□□□ -2.06
SEC4YFL005W RPC17P47076 161 aa2.16□□□□□ -2.06
SEC4YFL005W RSM10Q03201 203 aa2.16□□□□□ -2.06
SEC4YFL005W PEX12Q04370 399 aa2.16□□□□□ -2.06
SEC4YFL005W FAR8Q05040 523 aa2.16□□□□□ -2.06
SEC4YFL005W YLR179CQ06252 201 aaKnown RBP2.16□□□□□ -2.06
SEC4YFL005W CLB6P32943 380 aa2.15□□□□□ -2.07
SEC4YFL005W VPS21P36017 210 aaKnown RBP2.15□□□□□ -2.07
SEC4YFL005W YMR144WP40214 342 aaKnown RBP2.15□□□□□ -2.07
SEC4YFL005W GRX3Q03835 250 aa2.15□□□□□ -2.07
SEC4YFL005W YLR126CQ12288 251 aa2.15□□□□□ -2.07
SEC4YFL005W SAS5Q99314 248 aa2.15□□□□□ -2.07
SEC4YFL005W FKS1P38631 1876 aaKnown RBP2.15□□□□□ -2.07
SEC4YFL005W ERD2P18414 219 aa2.14□□□□□ -2.07
SEC4YFL005W RPB4P20433 221 aaPredicted RBP2.14□□□□□ -2.07
SEC4YFL005W RPL24BP24000 155 aaKnown RBP2.14□□□□□ -2.07
SEC4YFL005W BMH2P34730 273 aaKnown RBP2.14□□□□□ -2.07
SEC4YFL005W RTR1P40084 226 aaPredicted RBP2.14□□□□□ -2.07
SEC4YFL005W GCN20P43535 752 aaKnown RBP2.14□□□□□ -2.07
SEC4YFL005W CAB4P53332 305 aa2.14□□□□□ -2.07
SEC4YFL005W GIM3P53900 129 aa2.14□□□□□ -2.07
SEC4YFL005W ATG38Q05789 226 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms