RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W MRPL39P36533 70 aa4.04□□□□□ -1.76
UBC6YER100W PHO89P38361 574 aa4.04□□□□□ -1.76
UBC6YER100W YHL044WP38727 235 aa4.04□□□□□ -1.76
UBC6YER100W YIL012WP40551 113 aa4.04□□□□□ -1.76
UBC6YER100W YIL001WP40560 513 aa4.04□□□□□ -1.76
UBC6YER100W TRM9P49957 279 aa4.04□□□□□ -1.76
UBC6YER100W YMR244WQ04018 355 aa4.04□□□□□ -1.76
UBC6YER100W PAL1Q05518 499 aaKnown RBP4.04□□□□□ -1.76
UBC6YER100W ECM19Q06011 112 aa4.04□□□□□ -1.76
UBC6YER100W YTH1Q06102 208 aaPredicted RBP4.04□□□□□ -1.76
UBC6YER100W HEM25Q07534 307 aa4.04□□□□□ -1.76
UBC6YER100W SYC1Q08553 188 aaPredicted RBP4.04□□□□□ -1.76
UBC6YER100W RAX2Q12465 1220 aa4.04□□□□□ -1.76
UBC6YER100W PSK1P31374 1356 aa4.03□□□□□ -1.76
UBC6YER100W ASP1P38986 381 aaPredicted RBP4.03□□□□□ -1.76
UBC6YER100W RRT13P40042 185 aa4.03□□□□□ -1.76
UBC6YER100W PGU1P47180 361 aa4.03□□□□□ -1.76
UBC6YER100W RMR1P53060 241 aa4.03□□□□□ -1.76
UBC6YER100W SDT1P53078 280 aa4.03□□□□□ -1.76
UBC6YER100W ALG13P53178 202 aa4.03□□□□□ -1.76
UBC6YER100W DIA1P54005 336 aa4.03□□□□□ -1.76
UBC6YER100W YLR152CP54072 576 aa4.03□□□□□ -1.76
UBC6YER100W FAR8Q05040 523 aa4.03□□□□□ -1.76
UBC6YER100W YOL029CQ08187 201 aa4.03□□□□□ -1.76
UBC6YER100W YOR186WQ08560 144 aa4.03□□□□□ -1.76
UBC6YER100W YOL085CQ99345 113 aa4.03□□□□□ -1.76
UBC6YER100W ERD2P18414 219 aa4.02□□□□□ -1.77
UBC6YER100W ECM34P38728 170 aa4.02□□□□□ -1.77
UBC6YER100W YMR144WP40214 342 aaKnown RBP4.02□□□□□ -1.77
UBC6YER100W OST3P48439 350 aa4.02□□□□□ -1.77
UBC6YER100W YGL118CP53132 145 aa4.02□□□□□ -1.77
UBC6YER100W YNL046WP53956 172 aa4.02□□□□□ -1.77
UBC6YER100W GIM5Q04493 163 aa4.02□□□□□ -1.77
UBC6YER100W YDR124WQ04608 324 aa4.02□□□□□ -1.77
UBC6YER100W YAL067W-AQ8TGK6 75 aa4.02□□□□□ -1.77
UBC6YER100W TUS1Q06412 1307 aa4.01□□□□□ -1.77
UBC6YER100W CBP6P07253 162 aaPredicted RBP4.01□□□□□ -1.77
UBC6YER100W MET2P08465 486 aa4.01□□□□□ -1.77
UBC6YER100W URA6P15700 204 aa4.01□□□□□ -1.77
UBC6YER100W CSG2P35206 410 aa4.01□□□□□ -1.77
UBC6YER100W TRM5P38793 499 aa4.01□□□□□ -1.77
UBC6YER100W BMT5P40493 336 aa4.01□□□□□ -1.77
UBC6YER100W UFE1P41834 346 aa4.01□□□□□ -1.77
UBC6YER100W MEP2P41948 499 aa4.01□□□□□ -1.77
UBC6YER100W UFD1P53044 361 aa4.01□□□□□ -1.77
UBC6YER100W TOS8P53147 276 aa4.01□□□□□ -1.77
UBC6YER100W PPH21P23594 369 aa4□□□□□ -1.77
UBC6YER100W VPS51P36116 164 aa4□□□□□ -1.77
UBC6YER100W SEC72P39742 193 aaKnown RBP4□□□□□ -1.77
UBC6YER100W SYS1P41544 203 aa4□□□□□ -1.77
UBC6YER100W YJR141WP47172 347 aaPredicted RBP4□□□□□ -1.77
UBC6YER100W YGL262WP53054 175 aa4□□□□□ -1.77
UBC6YER100W MRPS16Q02608 121 aa4□□□□□ -1.77
UBC6YER100W GOT1Q03554 138 aa4□□□□□ -1.77
UBC6YER100W SIR4P11978 1358 aa4□□□□□ -1.77
UBC6YER100W YEL045CP32616 141 aa3.99□□□□□ -1.77
UBC6YER100W YCR087C-AP37263 153 aa3.99□□□□□ -1.77
UBC6YER100W SWT21P53873 357 aaPredicted RBP3.99□□□□□ -1.77
UBC6YER100W NNT1Q05874 261 aa3.99□□□□□ -1.77
UBC6YER100W ATG5Q12380 294 aa3.99□□□□□ -1.77
UBC6YER100W RPB9P27999 122 aa3.98□□□□□ -1.77
UBC6YER100W DBP7P36120 742 aaKnown RBP3.98□□□□□ -1.77
UBC6YER100W ARN2P38724 620 aa3.98□□□□□ -1.77
UBC6YER100W ERG10P41338 398 aaKnown RBP3.98□□□□□ -1.77
UBC6YER100W PDR17P53844 350 aa3.98□□□□□ -1.77
UBC6YER100W TVP15Q03860 143 aa3.98□□□□□ -1.77
UBC6YER100W GPM2Q12008 311 aa3.98□□□□□ -1.77
UBC6YER100W SMT3Q12306 101 aaKnown RBP3.98□□□□□ -1.77
UBC6YER100W MRX4Q12467 430 aa3.98□□□□□ -1.77
UBC6YER100W HSP26P15992 214 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
UBC6YER100W SRY1P36007 326 aa3.97□□□□□ -1.77
UBC6YER100W RPE1P46969 238 aa3.97□□□□□ -1.77
UBC6YER100W YGL034CP53186 121 aa3.97□□□□□ -1.77
UBC6YER100W EFM5P53200 248 aaKnown RBP3.97□□□□□ -1.77
UBC6YER100W SYF2P53277 215 aaPredicted RBP3.97□□□□□ -1.77
UBC6YER100W FUS2Q05670 677 aa3.97□□□□□ -1.77
UBC6YER100W YBL008W-AQ3E821 79 aa3.97□□□□□ -1.77
UBC6YER100W YPL229WQ99395 206 aa3.97□□□□□ -1.77
UBC6YER100W RPL35AP0CX84 120 aaKnown RBP3.96□□□□□ -1.78
UBC6YER100W RPL35BP0CX85 120 aaKnown RBP3.96□□□□□ -1.78
UBC6YER100W CKA2P19454 339 aa3.96□□□□□ -1.78
UBC6YER100W COX10P21592 462 aa3.96□□□□□ -1.78
UBC6YER100W RME1P32338 300 aaKnown RBP3.96□□□□□ -1.78
UBC6YER100W AST1P35183 429 aa3.96□□□□□ -1.78
UBC6YER100W PEX17P40155 199 aa3.96□□□□□ -1.78
UBC6YER100W YMR279CQ03263 540 aa3.96□□□□□ -1.78
UBC6YER100W YML108WQ03759 105 aa3.96□□□□□ -1.78
UBC6YER100W TSA2Q04120 196 aa3.96□□□□□ -1.78
UBC6YER100W CDD1Q06549 142 aa3.96□□□□□ -1.78
UBC6YER100W YET3Q07451 203 aa3.96□□□□□ -1.78
UBC6YER100W YPS3Q12303 508 aa3.96□□□□□ -1.78
UBC6YER100W TEM1P38987 245 aa3.95□□□□□ -1.78
UBC6YER100W SNM1P40993 198 aa3.95□□□□□ -1.78
UBC6YER100W ILM1P47155 203 aa3.95□□□□□ -1.78
UBC6YER100W BXI1P48558 297 aa3.95□□□□□ -1.78
UBC6YER100W CAX4P53223 239 aa3.95□□□□□ -1.78
UBC6YER100W DID2P69771 204 aa3.95□□□□□ -1.78
UBC6YER100W OSH6Q02201 448 aa3.95□□□□□ -1.78
UBC6YER100W EMP46Q12396 444 aa3.95□□□□□ -1.78
UBC6YER100W CDC28P00546 298 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms