RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W ORT1Q12375 292 aa3.7□□□□□ -1.82
TPA1YER049W UBI4P0CG63 381 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W RPL40AP0CH08 128 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W RPL40BP0CH09 128 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W YPK2P18961 677 aa3.69□□□□□ -1.82
TPA1YER049W ERG4P25340 473 aa3.69□□□□□ -1.82
TPA1YER049W FEN2P25621 512 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W BUB3P26449 341 aa3.69□□□□□ -1.82
TPA1YER049W FMT1P32785 401 aa3.69□□□□□ -1.82
TPA1YER049W MDL1P33310 695 aa3.69□□□□□ -1.82
TPA1YER049W YKL071WP36086 256 aa3.69□□□□□ -1.82
TPA1YER049W FMP10P40098 244 aa3.69□□□□□ -1.82
TPA1YER049W AVT7P40501 490 aa3.69□□□□□ -1.82
TPA1YER049W YIL077CP40508 320 aa3.69□□□□□ -1.82
TPA1YER049W QRI1P43123 477 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W YJL163CP46996 555 aa3.69□□□□□ -1.82
TPA1YER049W GPI14P47088 403 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W UBC11P52492 156 aa3.69□□□□□ -1.82
TPA1YER049W PNC1P53184 216 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W OKP1P53298 406 aa3.69□□□□□ -1.82
TPA1YER049W TDA7P53882 636 aaPredicted RBP3.69□□□□□ -1.82
TPA1YER049W BUD25P85052 153 aa3.69□□□□□ -1.82
TPA1YER049W YCL001W-AP87012 153 aa3.69□□□□□ -1.82
TPA1YER049W SNO1Q03144 224 aa3.69□□□□□ -1.82
TPA1YER049W MRPL51Q06090 140 aaPredicted RBP3.69□□□□□ -1.82
TPA1YER049W SYM1Q06563 197 aa3.69□□□□□ -1.82
TPA1YER049W BER1Q06688 274 aaKnown RBP3.69□□□□□ -1.82
TPA1YER049W SET6Q12529 373 aa3.69□□□□□ -1.82
TPA1YER049W YPR145C-AQ2V2P0 78 aa3.69□□□□□ -1.82
TPA1YER049W YJR112W-AQ3E743 109 aa3.69□□□□□ -1.82
TPA1YER049W TFB5Q3E7C1 72 aaPredicted RBP3.69□□□□□ -1.82
TPA1YER049W YFR010W-AP0C5N0 62 aa3.68□□□□□ -1.82
TPA1YER049W NAM2P11325 894 aa3.68□□□□□ -1.82
TPA1YER049W HNM1P19807 563 aa3.68□□□□□ -1.82
TPA1YER049W MGR1P25573 417 aa3.68□□□□□ -1.82
TPA1YER049W MSK1P32048 576 aa3.68□□□□□ -1.82
TPA1YER049W DBF20P32328 564 aa3.68□□□□□ -1.82
TPA1YER049W MDH3P32419 343 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
TPA1YER049W SRB5P32585 307 aa3.68□□□□□ -1.82
TPA1YER049W PTR2P32901 601 aa3.68□□□□□ -1.82
TPA1YER049W PPZ2P33329 710 aa3.68□□□□□ -1.82
TPA1YER049W COS9P36034 407 aa3.68□□□□□ -1.82
TPA1YER049W PAN3P36102 679 aaPredicted RBP3.68□□□□□ -1.82
TPA1YER049W AUR1P36107 401 aaPredicted RBP3.68□□□□□ -1.82
TPA1YER049W ATG8P38182 117 aaRIP-Chip data3.68□□□□□ -1.82not detected
TPA1YER049W TRR2P38816 342 aa3.68□□□□□ -1.82
TPA1YER049W GPI16P38875 610 aa3.68□□□□□ -1.82
TPA1YER049W VPS52P39904 641 aa3.68□□□□□ -1.82
TPA1YER049W RMD6P39975 231 aa3.68□□□□□ -1.82
TPA1YER049W EMC5P40540 141 aa3.68□□□□□ -1.82
TPA1YER049W AGX1P43567 385 aa3.68□□□□□ -1.82
TPA1YER049W CIN2P46670 268 aa3.68□□□□□ -1.82
TPA1YER049W SSN8P47821 323 aa3.68□□□□□ -1.82
TPA1YER049W SOL1P50278 321 aa3.68□□□□□ -1.82
TPA1YER049W FYV6P53913 173 aa3.68□□□□□ -1.82
TPA1YER049W APJ1P53940 528 aa3.68□□□□□ -1.82
TPA1YER049W CTF19Q02732 369 aa3.68□□□□□ -1.82
TPA1YER049W YML096WQ04489 525 aa3.68□□□□□ -1.82
TPA1YER049W YFT2Q06676 274 aa3.68□□□□□ -1.82
TPA1YER049W ODC2Q99297 307 aa3.68□□□□□ -1.82
TPA1YER049W TOM1Q03280 3268 aa3.68□□□□□ -1.82
TPA1YER049W TPI1P00942 248 aaKnown RBP3.68□□□□□ -1.82
TPA1YER049W GAL7P08431 366 aa3.68□□□□□ -1.82
TPA1YER049W URA6P15700 204 aa3.68□□□□□ -1.82
TPA1YER049W PET18P25362 215 aa3.68□□□□□ -1.82
TPA1YER049W PBN1P25580 416 aa3.68□□□□□ -1.82
TPA1YER049W TIP1P27654 210 aaPredicted RBP3.68□□□□□ -1.82
TPA1YER049W SIP1P32578 815 aa3.68□□□□□ -1.82
TPA1YER049W TRS65P32893 560 aa3.68□□□□□ -1.82
TPA1YER049W CLB6P32943 380 aa3.68□□□□□ -1.82
TPA1YER049W MSN4P33749 630 aa3.68□□□□□ -1.82
TPA1YER049W APD1P38281 316 aa3.68□□□□□ -1.82
TPA1YER049W SEN34P39707 275 aa3.68□□□□□ -1.82
TPA1YER049W IDP2P41939 412 aa3.68□□□□□ -1.82
TPA1YER049W NSE4P43124 402 aa3.68□□□□□ -1.82
TPA1YER049W FHN1P53279 174 aa3.68□□□□□ -1.82
TPA1YER049W MTM1P53320 366 aa3.68□□□□□ -1.82
TPA1YER049W SCW4P53334 386 aaKnown RBP3.68□□□□□ -1.82
TPA1YER049W MPP6P53725 186 aaPredicted RBP3.68□□□□□ -1.82
TPA1YER049W AAH1P53909 347 aa3.68□□□□□ -1.82
TPA1YER049W AQR1P53943 586 aa3.68□□□□□ -1.82
TPA1YER049W ACT1P60010 375 aaKnown RBP3.68□□□□□ -1.82
TPA1YER049W RHO3Q00245 231 aaKnown RBP3.68□□□□□ -1.82
TPA1YER049W INP1Q03694 420 aa3.68□□□□□ -1.82
TPA1YER049W HEM25Q07534 307 aa3.68□□□□□ -1.82
TPA1YER049W PET20Q99373 253 aa3.68□□□□□ -1.82
TPA1YER049W YML003WP0CF16 290 aa3.67□□□□□ -1.82
TPA1YER049W IFM1P25038 676 aa3.67□□□□□ -1.82
TPA1YER049W URK1P27515 501 aa3.67□□□□□ -1.82
TPA1YER049W VMA5P31412 392 aaKnown RBP3.67□□□□□ -1.82
TPA1YER049W YBL010CP32788 280 aa3.67□□□□□ -1.82
TPA1YER049W GPX1P36014 167 aa3.67□□□□□ -1.82
TPA1YER049W EHT1P38295 451 aa3.67□□□□□ -1.82
TPA1YER049W SHG1P38337 142 aa3.67□□□□□ -1.82
TPA1YER049W CHS7P38843 316 aa3.67□□□□□ -1.82
TPA1YER049W YIP4P53093 235 aa3.67□□□□□ -1.82
TPA1YER049W TPC1P53257 314 aa3.67□□□□□ -1.82
TPA1YER049W OGG1P53397 376 aaPredicted RBP3.67□□□□□ -1.82
TPA1YER049W YLR152CP54072 576 aa3.67□□□□□ -1.82
TPA1YER049W MRPL1Q04599 285 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms