RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	TPS1	Q00764	495 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	YPL077C	Q02831	240 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	YMR279C	Q03263	540 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	RIM9	Q04734	239 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	ERP1	Q05359	219 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	PIN3	Q06449	215 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	HRT1	Q08273	121 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	NIP7	Q08962	181 aa	Known RBP	3.54	□□□□□ -1.84
UBC8	YEL012W	YPR202W	Q08993	238 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	AYT1	Q12226	474 aa		3.54	□□□□□ -1.84
UBC8	YEL012W	MNS1	P32906	549 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	ARC19	P33204	171 aa	Known RBP	3.53	□□□□□ -1.84
UBC8	YEL012W	YBR063C	P38083	404 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	HPM1	P40481	377 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	AVT4	P50944	713 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	YIP1	P53039	248 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	DSL1	P53847	754 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	SNT309	Q06091	175 aa	Predicted RBP	3.53	□□□□□ -1.84
UBC8	YEL012W	CTS2	Q06350	511 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	YCL048W-A	Q2V2Q2	79 aa		3.53	□□□□□ -1.84
UBC8	YEL012W	MSI1	P13712	422 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	UGA1	P17649	471 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	PPA2	P28239	310 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	GLC7	P32598	312 aa	Known RBP	3.52	□□□□□ -1.85
UBC8	YEL012W	CLB6	P32943	380 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	PMU1	P36069	295 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	CTR2	P38865	189 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	COS10	P52924	374 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	MPP6	P53725	186 aa	Predicted RBP	3.52	□□□□□ -1.85
UBC8	YEL012W	IGO1	P53897	168 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	SPO77	Q06134	477 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	COQ10	Q08058	207 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	SKI7	Q08491	747 aa	Predicted RBP	3.52	□□□□□ -1.85
UBC8	YEL012W	MUM3	Q08750	479 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	AEP3	Q12089	606 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	ORT1	Q12375	292 aa		3.52	□□□□□ -1.85
UBC8	YEL012W	DBP3	P20447	523 aa	Known RBP	3.51	□□□□□ -1.85
UBC8	YEL012W	PUT3	P25502	979 aa	Predicted RBP	3.51	□□□□□ -1.85
UBC8	YEL012W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
UBC8	YEL012W	GDH2	P33327	1092 aa	Known RBP	3.51	□□□□□ -1.85
UBC8	YEL012W	YKL102C	P34249	101 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	MLH1	P38920	769 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	SNM1	P40993	198 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	GCN20	P43535	752 aa	Known RBP	3.51	□□□□□ -1.85
UBC8	YEL012W	NUP57	P48837	541 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	MPC1	P53157	130 aa	Known RBP	3.51	□□□□□ -1.85
UBC8	YEL012W	GPI15	P53961	229 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	ASI3	P53983	676 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	ODC1	Q03028	310 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	RNH202	Q05635	350 aa		3.51	□□□□□ -1.85
UBC8	YEL012W	THP2	O13539	261 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	ATP6	P00854	259 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	RPL39	P04650	51 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	RPS23A	P0CX29	145 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	RPS23B	P0CX30	145 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	ATR1	P13090	542 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	PMR1	P13586	950 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	PET9	P18239	318 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	RPS5	P26783	225 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	CAM1	P29547	415 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	RPS0A	P32905	252 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	JEN1	P36035	616 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	IST2	P38250	946 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	RCY1	P39531	840 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	YGR201C	P42936	225 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	YHC3	P47040	408 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	DBP9	Q06218	594 aa	Known RBP	3.5	□□□□□ -1.85
UBC8	YEL012W	NDL1	Q06568	189 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	MFG1	Q07684	458 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	YLR108C	Q12259	485 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	MCT1	Q12283	360 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	IZH2	Q12442	317 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	FSH3	Q99369	266 aa		3.5	□□□□□ -1.85
UBC8	YEL012W	TIM9	O74700	87 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	TIP1	P27654	210 aa	Predicted RBP	3.49	□□□□□ -1.85
UBC8	YEL012W	VPH2	P32341	215 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
UBC8	YEL012W	PEX18	P38855	283 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	MPM1	P40364	252 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	FLX1	P40464	311 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	YDL186W	P48568	277 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	MMT1	Q03218	510 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	PRM15	Q03262	622 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	IPK1	Q06667	281 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	UIP4	Q08926	304 aa		3.49	□□□□□ -1.85
UBC8	YEL012W	YOL163W	P0CF20	169 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	GPX1	P36014	167 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	YKL071W	P36086	256 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	ADH5	P38113	351 aa	Known RBP	3.48	□□□□□ -1.85
UBC8	YEL012W	AGE2	P40529	298 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	ABM1	P47146	123 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	HMS2	P47175	358 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	YIP5	P53108	310 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	YGR016W	P53209	190 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	POP6	P53218	158 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	YNR048W	P53740	393 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	COS1	P53822	381 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	DML1	Q03652	475 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	YMR317W	Q04893	1140 aa		3.48	□□□□□ -1.85
UBC8	YEL012W	DYN3	Q04949	312 aa		3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 326.4 ms