RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPS28YDR337W IZH2Q12442 317 aa5.87□□□□□ -1.47
MRPS28YDR337W RPL35AP0CX84 120 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W RPL35BP0CX85 120 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W ARO3P14843 370 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W DIT1P21623 536 aa5.86□□□□□ -1.47
MRPS28YDR337W VMA5P31412 392 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W AFG1P32317 509 aa5.86□□□□□ -1.47
MRPS28YDR337W PPZ2P33329 710 aa5.86□□□□□ -1.47
MRPS28YDR337W MRPL3P36516 390 aa5.86□□□□□ -1.47
MRPS28YDR337W YBR096WP38256 230 aa5.86□□□□□ -1.47
MRPS28YDR337W IDP2P41939 412 aa5.86□□□□□ -1.47
MRPS28YDR337W RSM27P53305 110 aa5.86□□□□□ -1.47
MRPS28YDR337W RPL6AQ02326 176 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W MRPS16Q02608 121 aa5.86□□□□□ -1.47
MRPS28YDR337W SRP1Q02821 542 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W TY1A-DR2Q03964 440 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W HNT1Q04344 158 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W PRS5Q12265 496 aaKnown RBP5.86□□□□□ -1.47
MRPS28YDR337W ERP4Q12450 207 aa5.86□□□□□ -1.47
MRPS28YDR337W FOL3Q12676 427 aaPredicted RBP5.86□□□□□ -1.47
MRPS28YDR337W FSH3Q99369 266 aa5.86□□□□□ -1.47
MRPS28YDR337W RPL6BP05739 176 aaKnown RBP5.85□□□□□ -1.47
MRPS28YDR337W HEM4P06174 275 aa5.85□□□□□ -1.47
MRPS28YDR337W PHO2P07269 559 aa5.85□□□□□ -1.47
MRPS28YDR337W CHO1P08456 276 aa5.85□□□□□ -1.47
MRPS28YDR337W DSF1P0CX08 502 aa5.85□□□□□ -1.47
MRPS28YDR337W YNR073CP0CX09 502 aa5.85□□□□□ -1.47
MRPS28YDR337W NHP6BP11633 99 aaKnown RBP5.85□□□□□ -1.47
MRPS28YDR337W MCM1P11746 286 aa5.85□□□□□ -1.47
MRPS28YDR337W ATG15P25641 520 aa5.85□□□□□ -1.47
MRPS28YDR337W YKL063CP35725 167 aa5.85□□□□□ -1.47
MRPS28YDR337W UTP30P36144 274 aaKnown RBP5.85□□□□□ -1.47
MRPS28YDR337W VMA22P38784 181 aa5.85□□□□□ -1.47
MRPS28YDR337W SOL3P38858 249 aa5.85□□□□□ -1.47
MRPS28YDR337W XBP1P40489 647 aa5.85□□□□□ -1.47
MRPS28YDR337W GPG1P53130 126 aa5.85□□□□□ -1.47
MRPS28YDR337W HHT1P61830 136 aa5.85□□□□□ -1.47
MRPS28YDR337W YPL077CQ02831 240 aa5.85□□□□□ -1.47
MRPS28YDR337W PLP1Q04004 230 aa5.85□□□□□ -1.47
MRPS28YDR337W TGS1Q12052 315 aa5.85□□□□□ -1.47
MRPS28YDR337W MSI1P13712 422 aa5.84□□□□□ -1.47
MRPS28YDR337W HNM1P19807 563 aa5.84□□□□□ -1.47
MRPS28YDR337W DEG1P31115 442 aaKnown RBP5.84□□□□□ -1.47
MRPS28YDR337W MSS1P32559 526 aaPredicted RBP5.84□□□□□ -1.47
MRPS28YDR337W APL3P38065 1025 aa5.84□□□□□ -1.47
MRPS28YDR337W YND1P40009 630 aa5.84□□□□□ -1.47
MRPS28YDR337W YER084WP40057 128 aa5.84□□□□□ -1.47
MRPS28YDR337W MOB2P43563 287 aa5.84□□□□□ -1.47
MRPS28YDR337W TYW3P53177 273 aa5.84□□□□□ -1.47
MRPS28YDR337W GIM3P53900 129 aa5.84□□□□□ -1.47
MRPS28YDR337W VBA1Q04301 562 aa5.84□□□□□ -1.47
MRPS28YDR337W NCE102Q12207 173 aaRIP-Chip data5.84□□□□□ -1.47not detected
MRPS28YDR337W USB1Q12208 290 aaKnown RBP5.84□□□□□ -1.47
MRPS28YDR337W TEL1P38110 2787 aa5.84□□□□□ -1.47
MRPS28YDR337W CDC28P00546 298 aaKnown RBP5.83□□□□□ -1.48
MRPS28YDR337W IPP1P00817 287 aaKnown RBP5.83□□□□□ -1.48
MRPS28YDR337W RFA1P22336 621 aaKnown RBP5.83□□□□□ -1.48
MRPS28YDR337W MAK32P23060 363 aa5.83□□□□□ -1.48
MRPS28YDR337W MCH2P36032 473 aa5.83□□□□□ -1.48
MRPS28YDR337W YMR262WP38430 313 aa5.83□□□□□ -1.48
MRPS28YDR337W RRF1P38771 230 aa5.83□□□□□ -1.48
MRPS28YDR337W FLX1P40464 311 aa5.83□□□□□ -1.48
MRPS28YDR337W UFD1P53044 361 aa5.83□□□□□ -1.48
MRPS28YDR337W NSA1P53136 463 aaPredicted RBP5.83□□□□□ -1.48
MRPS28YDR337W YML018CQ03730 393 aa5.83□□□□□ -1.48
MRPS28YDR337W SPR28Q04921 423 aa5.83□□□□□ -1.48
MRPS28YDR337W CRR1Q05790 422 aa5.83□□□□□ -1.48
MRPS28YDR337W MRX9Q07349 420 aaKnown RBP5.83□□□□□ -1.48
MRPS28YDR337W FIT3Q08907 204 aa5.83□□□□□ -1.48
MRPS28YDR337W YOR385WQ08909 290 aa5.83□□□□□ -1.48
MRPS28YDR337W RNH203Q12338 110 aa5.83□□□□□ -1.48
MRPS28YDR337W IRA1P18963 3092 aa5.83□□□□□ -1.48
MRPS28YDR337W REP2P03872 296 aa5.82□□□□□ -1.48
MRPS28YDR337W RPL25P04456 142 aaKnown RBP5.82□□□□□ -1.48
MRPS28YDR337W PAN3P36102 679 aaPredicted RBP5.82□□□□□ -1.48
MRPS28YDR337W MRPL27P36526 146 aaPredicted RBP5.82□□□□□ -1.48
MRPS28YDR337W FIG1P38224 298 aa5.82□□□□□ -1.48
MRPS28YDR337W PTI1P39927 425 aaPredicted RBP5.82□□□□□ -1.48
MRPS28YDR337W PIG2P40187 538 aa5.82□□□□□ -1.48
MRPS28YDR337W QDR1P40475 563 aa5.82□□□□□ -1.48
MRPS28YDR337W GNA1P43577 159 aaPredicted RBP5.82□□□□□ -1.48
MRPS28YDR337W HAS1Q03532 505 aaKnown RBP5.82□□□□□ -1.48
MRPS28YDR337W AAC1P04710 309 aa5.81□□□□□ -1.48
MRPS28YDR337W ARG80P07249 177 aa5.81□□□□□ -1.48
MRPS28YDR337W RFA3P26755 122 aaKnown RBP5.81□□□□□ -1.48
MRPS28YDR337W AGA2P32781 87 aa5.81□□□□□ -1.48
MRPS28YDR337W REC114P32841 428 aa5.81□□□□□ -1.48
MRPS28YDR337W GLY1P37303 387 aaKnown RBP5.81□□□□□ -1.48
MRPS28YDR337W ARO9P38840 513 aaPredicted RBP5.81□□□□□ -1.48
MRPS28YDR337W YER079WP40052 210 aaKnown RBP5.81□□□□□ -1.48
MRPS28YDR337W YER137CP40083 148 aaKnown RBP5.81□□□□□ -1.48
MRPS28YDR337W OST1P41543 476 aaKnown RBP5.81□□□□□ -1.48
MRPS28YDR337W SIP18P50263 79 aa5.81□□□□□ -1.48
MRPS28YDR337W GTF1P53260 183 aaPredicted RBP5.81□□□□□ -1.48
MRPS28YDR337W OKP1P53298 406 aa5.81□□□□□ -1.48
MRPS28YDR337W MRPL50P53724 139 aa5.81□□□□□ -1.48
MRPS28YDR337W YDR248CQ03786 193 aa5.81□□□□□ -1.48
MRPS28YDR337W YDR391CQ04170 232 aa5.81□□□□□ -1.48
MRPS28YDR337W COA4Q05809 96 aa5.81□□□□□ -1.48
MRPS28YDR337W RRS1Q08746 203 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms