RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	MTL1	P53214	551 aa		6.29	□□□□□ -1.4
SKP1	YDR328C	SRL2	Q12020	392 aa		6.29	□□□□□ -1.4
SKP1	YDR328C	USB1	Q12208	290 aa	Known RBP	6.29	□□□□□ -1.4
SKP1	YDR328C	HTZ1	Q12692	134 aa	Known RBP	6.29	□□□□□ -1.4
SKP1	YDR328C	ODC2	Q99297	307 aa		6.29	□□□□□ -1.4
SKP1	YDR328C	BUD23	P25627	275 aa	Predicted RBP	6.28	□□□□□ -1.4
SKP1	YDR328C	DEG1	P31115	442 aa	Known RBP	6.28	□□□□□ -1.4
SKP1	YDR328C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
SKP1	YDR328C	MTC7	P32633	139 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	AVT7	P40501	490 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	YFL051C	P43552	160 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	OTU1	P43558	301 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	AIM25	P47140	327 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	BXI1	P48558	297 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	AVT4	P50944	713 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	NSA1	P53136	463 aa	Predicted RBP	6.28	□□□□□ -1.4
SKP1	YDR328C	YGR042W	P53227	271 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	UTP15	Q04305	513 aa	Known RBP	6.28	□□□□□ -1.4
SKP1	YDR328C	MRL1	Q06815	381 aa		6.28	□□□□□ -1.4
SKP1	YDR328C	CDC28	P00546	298 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	SPS2	P08459	502 aa		6.27	□□□□□ -1.41
SKP1	YDR328C	RPL35A	P0CX84	120 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	RPL35B	P0CX85	120 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	URA6	P15700	204 aa		6.27	□□□□□ -1.41
SKP1	YDR328C	MSS1	P32559	526 aa	Predicted RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	REC114	P32841	428 aa		6.27	□□□□□ -1.41
SKP1	YDR328C	MRPL36	P36531	177 aa		6.27	□□□□□ -1.41
SKP1	YDR328C	TCM62	P38228	572 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	OST1	P41543	476 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	MRPS16	Q02608	121 aa		6.27	□□□□□ -1.41
SKP1	YDR328C	HNT1	Q04344	158 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	SPR28	Q04921	423 aa		6.27	□□□□□ -1.41
SKP1	YDR328C	MRX9	Q07349	420 aa	Known RBP	6.27	□□□□□ -1.41
SKP1	YDR328C	MET3	P08536	511 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	SSA3	P09435	649 aa	Known RBP	6.26	□□□□□ -1.41
SKP1	YDR328C	NHP6B	P11633	99 aa	Known RBP	6.26	□□□□□ -1.41
SKP1	YDR328C	ARO3	P14843	370 aa	Known RBP	6.26	□□□□□ -1.41
SKP1	YDR328C	CDC23	P16522	626 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	YCP4	P25349	247 aa	Known RBP	6.26	□□□□□ -1.41
SKP1	YDR328C	ACH1	P32316	526 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	CLB6	P32943	380 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	SRL3	P36167	246 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	FLO10	P36170	1169 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	YBR242W	P38331	238 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	YND1	P40009	630 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	FLX1	P40464	311 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	ACS1	Q01574	713 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	TY1A-MR1	Q04215	440 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	DLT1	Q04216	342 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	YLR283W	Q05867	314 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	RSC58	Q07979	502 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	RFU1	Q08003	200 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	RRS1	Q08746	203 aa	Known RBP	6.26	□□□□□ -1.41
SKP1	YDR328C	YOR385W	Q08909	290 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	FSH3	Q99369	266 aa		6.26	□□□□□ -1.41
SKP1	YDR328C	MSI1	P13712	422 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	SAG1	P20840	650 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	ATG22	P25568	528 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	RFA3	P26755	122 aa	Known RBP	6.25	□□□□□ -1.41
SKP1	YDR328C	VMA5	P31412	392 aa	Known RBP	6.25	□□□□□ -1.41
SKP1	YDR328C	RNP1	P32385	249 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	GLC7	P32598	312 aa	Known RBP	6.25	□□□□□ -1.41
SKP1	YDR328C	MCH2	P36032	473 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	MRPL3	P36516	390 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	ARC40	P38328	384 aa	Known RBP	6.25	□□□□□ -1.41
SKP1	YDR328C	TOK1	P40310	691 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	TY1A-DR2	Q03964	440 aa	Known RBP	6.25	□□□□□ -1.41
SKP1	YDR328C	YPR196W	Q06595	470 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	YLR031W	Q07978	186 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	NCE102	Q12207	173 aa	RIP-Chip data	6.25	□□□□□ -1.41	not detected
SKP1	YDR328C	HUT1	Q12520	339 aa		6.25	□□□□□ -1.41
SKP1	YDR328C	TDH2	P00358	332 aa	Known RBP	6.24	□□□□□ -1.41
SKP1	YDR328C	RPS31	P05759	152 aa	Known RBP	6.24	□□□□□ -1.41
SKP1	YDR328C	HNM1	P19807	563 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	VAM7	P32912	316 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	PPQ1	P32945	549 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	MRPL27	P36526	146 aa	Predicted RBP	6.24	□□□□□ -1.41
SKP1	YDR328C	YGP1	P38616	354 aa	Known RBP	6.24	□□□□□ -1.41
SKP1	YDR328C	PIG2	P40187	538 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	SKP1	P52286	194 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	TYW3	P53177	273 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	MRPL13	Q02204	264 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	YPL077C	Q02831	240 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	SCM3	Q12334	223 aa		6.24	□□□□□ -1.41
SKP1	YDR328C	MEC1	P38111	2368 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	AAC1	P04710	309 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	CDC34	P14682	295 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	GCN3	P14741	305 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	RFA1	P22336	621 aa	Known RBP	6.23	□□□□□ -1.41
SKP1	YDR328C	IFM1	P25038	676 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	RNA14	P25298	677 aa	Known RBP	6.23	□□□□□ -1.41
SKP1	YDR328C	PEX4	P29340	183 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	AGA2	P32781	87 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	YKL063C	P35725	167 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	FAT1	P38225	669 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	ARO9	P38840	513 aa	Predicted RBP	6.23	□□□□□ -1.41
SKP1	YDR328C	YMR144W	P40214	342 aa	Known RBP	6.23	□□□□□ -1.41
SKP1	YDR328C	MID1	P41821	548 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	EGT2	P42835	1041 aa		6.23	□□□□□ -1.41
SKP1	YDR328C	GWT1	P47026	490 aa		6.23	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 164.1 ms