RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W AVT6P40074 448 aa1.26□□□□□ -2.21
MSH5YDL154W RTR1P40084 226 aaPredicted RBP1.26□□□□□ -2.21
MSH5YDL154W RIO2P40160 425 aaKnown RBP1.26□□□□□ -2.21
MSH5YDL154W COA1P40452 197 aa1.26□□□□□ -2.21
MSH5YDL154W AVT7P40501 490 aa1.26□□□□□ -2.21
MSH5YDL154W BNA6P43619 295 aa1.26□□□□□ -2.21
MSH5YDL154W MRPL50P53724 139 aa1.26□□□□□ -2.21
MSH5YDL154W SWT21P53873 357 aaPredicted RBP1.26□□□□□ -2.21
MSH5YDL154W VPS60Q03390 229 aa1.26□□□□□ -2.21
MSH5YDL154W YOR114WQ12219 294 aa1.26□□□□□ -2.21
MSH5YDL154W RAD3P06839 778 aa1.25□□□□□ -2.21
MSH5YDL154W CPT1P17898 393 aa1.25□□□□□ -2.21
MSH5YDL154W POF1P25576 258 aa1.25□□□□□ -2.21
MSH5YDL154W AEP1P32493 518 aa1.25□□□□□ -2.21
MSH5YDL154W TRR2P38816 342 aa1.25□□□□□ -2.21
MSH5YDL154W VAB2P40003 282 aa1.25□□□□□ -2.21
MSH5YDL154W RRG9P40156 214 aa1.25□□□□□ -2.21
MSH5YDL154W MOB1P40484 314 aa1.25□□□□□ -2.21
MSH5YDL154W YIL059CP40520 121 aa1.25□□□□□ -2.21
MSH5YDL154W RSM27P53305 110 aa1.25□□□□□ -2.21
MSH5YDL154W ALG11P53954 548 aaKnown RBP1.25□□□□□ -2.21
MSH5YDL154W YPL113CQ02961 396 aa1.25□□□□□ -2.21
MSH5YDL154W SEC10Q06245 871 aa1.25□□□□□ -2.21
MSH5YDL154W IES4Q08561 116 aa1.25□□□□□ -2.21
MSH5YDL154W YBR056W-AI2HB52 66 aa1.25□□□□□ -2.21
MSH5YDL154W CUP2P15315 225 aa1.25□□□□□ -2.21
MSH5YDL154W RAD51P25454 400 aa1.25□□□□□ -2.21
MSH5YDL154W NTG1P31378 399 aa1.25□□□□□ -2.21
MSH5YDL154W ALK2P32789 676 aaPredicted RBP1.25□□□□□ -2.21
MSH5YDL154W CAT2P32796 670 aaKnown RBP1.25□□□□□ -2.21
MSH5YDL154W AST1P35183 429 aa1.25□□□□□ -2.21
MSH5YDL154W DDI1P40087 428 aa1.25□□□□□ -2.21
MSH5YDL154W LIF1P53150 421 aa1.25□□□□□ -2.21
MSH5YDL154W VBA1Q04301 562 aa1.25□□□□□ -2.21
MSH5YDL154W YDR114CQ04597 100 aa1.25□□□□□ -2.21
MSH5YDL154W ATG38Q05789 226 aaKnown RBP1.25□□□□□ -2.21
MSH5YDL154W CTS2Q06350 511 aa1.25□□□□□ -2.21
MSH5YDL154W RRT8Q08219 342 aa1.25□□□□□ -2.21
MSH5YDL154W YOS9Q99220 542 aa1.25□□□□□ -2.21
MSH5YDL154W YEL009C-AA0A023PZF2 135 aa1.24□□□□□ -2.21
MSH5YDL154W SPT3P06844 337 aa1.24□□□□□ -2.21
MSH5YDL154W ECO1P43605 281 aa1.24□□□□□ -2.21
MSH5YDL154W LSB1P53281 241 aa1.24□□□□□ -2.21
MSH5YDL154W YNL040WP53960 456 aaPredicted RBP1.24□□□□□ -2.21
MSH5YDL154W RNY1Q02933 434 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W BSC6Q08280 497 aa1.24□□□□□ -2.21
MSH5YDL154W YOR289WQ12012 251 aaPredicted RBP1.24□□□□□ -2.21
MSH5YDL154W RUD3Q12234 484 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W DUR1,2P32528 1835 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W POL2P21951 2222 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W RPO41P13433 1351 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W PET494P07390 489 aaPredicted RBP1.24□□□□□ -2.21
MSH5YDL154W OSM1P21375 501 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W PEX3P28795 441 aa1.24□□□□□ -2.21
MSH5YDL154W YHR045WP38775 560 aa1.24□□□□□ -2.21
MSH5YDL154W SCC4P40090 624 aa1.24□□□□□ -2.21
MSH5YDL154W BUD13P46947 266 aaPredicted RBP1.24□□□□□ -2.21
MSH5YDL154W SLX9P53251 210 aaPredicted RBP1.24□□□□□ -2.21
MSH5YDL154W YNL134CP53912 376 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W SMD1Q02260 146 aaPredicted RBP1.24□□□□□ -2.21
MSH5YDL154W SNZ1Q03148 297 aa1.24□□□□□ -2.21
MSH5YDL154W ECM19Q06011 112 aa1.24□□□□□ -2.21
MSH5YDL154W YLR173WQ06247 608 aa1.24□□□□□ -2.21
MSH5YDL154W YAL064W-BO13512 126 aa1.24□□□□□ -2.21
MSH5YDL154W ERG2P32352 222 aa1.24□□□□□ -2.21
MSH5YDL154W IME2P32581 645 aa1.24□□□□□ -2.21
MSH5YDL154W FMT1P32785 401 aa1.24□□□□□ -2.21
MSH5YDL154W POP7P38291 140 aa1.24□□□□□ -2.21
MSH5YDL154W YHB1P39676 399 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W RPL10P41805 221 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W SNZ3P43545 298 aa1.24□□□□□ -2.21
MSH5YDL154W TPN1P53099 579 aa1.24□□□□□ -2.21
MSH5YDL154W EFM5P53200 248 aaKnown RBP1.24□□□□□ -2.21
MSH5YDL154W HST4P53688 370 aa1.24□□□□□ -2.21
MSH5YDL154W SNZ2P53824 298 aa1.24□□□□□ -2.21
MSH5YDL154W ASI3P53983 676 aa1.24□□□□□ -2.21
MSH5YDL154W YOL085CQ99345 113 aa1.24□□□□□ -2.21
MSH5YDL154W RAD50P12753 1312 aa1.23□□□□□ -2.21
MSH5YDL154W MOT1P32333 1867 aa1.23□□□□□ -2.21
MSH5YDL154W RNA15P25299 296 aaPredicted RBP1.23□□□□□ -2.21
MSH5YDL154W YCR025CP25352 136 aa1.23□□□□□ -2.21
MSH5YDL154W VPH2P32341 215 aa1.23□□□□□ -2.21
MSH5YDL154W SRB4P32569 687 aa1.23□□□□□ -2.21
MSH5YDL154W SGE1P33335 543 aa1.23□□□□□ -2.21
MSH5YDL154W MSN4P33749 630 aa1.23□□□□□ -2.21
MSH5YDL154W POP8P38208 133 aa1.23□□□□□ -2.21
MSH5YDL154W MBA1P38300 278 aa1.23□□□□□ -2.21
MSH5YDL154W BFR1P38934 470 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
MSH5YDL154W PRM9P39551 298 aa1.23□□□□□ -2.21
MSH5YDL154W MNT4P53745 580 aa1.23□□□□□ -2.21
MSH5YDL154W PIN3Q06449 215 aa1.23□□□□□ -2.21
MSH5YDL154W ARV1Q06541 321 aa1.23□□□□□ -2.21
MSH5YDL154W RIO1Q12196 484 aaKnown RBP1.23□□□□□ -2.21
MSH5YDL154W YAK1P14680 807 aa1.23□□□□□ -2.21
MSH5YDL154W PHO80P20052 293 aa1.23□□□□□ -2.21
MSH5YDL154W VPS3P23643 1011 aa1.23□□□□□ -2.21
MSH5YDL154W RPB9P27999 122 aa1.23□□□□□ -2.21
MSH5YDL154W YPT52P36018 234 aaKnown RBP1.23□□□□□ -2.21
MSH5YDL154W HEK2P38199 381 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
MSH5YDL154W OPY1P38271 328 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms