RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C PBP1P53297 722 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C OKP1P53298 406 aa1.88□□□□□ -2.11
BRE1YDL074C HOL1P53389 586 aa1.88□□□□□ -2.11
BRE1YDL074C BSC5P53755 489 aa1.88□□□□□ -2.11
BRE1YDL074C ALG9P53868 555 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C ACT1P60010 375 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.88□□□□□ -2.11not detected
BRE1YDL074C MEH1Q02205 184 aa1.88□□□□□ -2.11
BRE1YDL074C YML018CQ03730 393 aa1.88□□□□□ -2.11
BRE1YDL074C CAB5Q03941 241 aa1.88□□□□□ -2.11
BRE1YDL074C YDR387CQ04162 555 aa1.88□□□□□ -2.11
BRE1YDL074C MCH4Q08268 501 aa1.88□□□□□ -2.11
BRE1YDL074C ATP16Q12165 160 aa1.88□□□□□ -2.11
BRE1YDL074C MED4Q12343 284 aa1.88□□□□□ -2.11
BRE1YDL074C YBR298C-AQ8TGK4 73 aa1.88□□□□□ -2.11
BRE1YDL074C YHR213W-AQ8TGT4 77 aa1.88□□□□□ -2.11
BRE1YDL074C CDC39P25655 2108 aaKnown RBP1.88□□□□□ -2.11
BRE1YDL074C BLM10P43583 2143 aa1.88□□□□□ -2.11
BRE1YDL074C BRR2P32639 2163 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C GAL1P04385 528 aa1.87□□□□□ -2.11
BRE1YDL074C OPI3P05375 206 aa1.87□□□□□ -2.11
BRE1YDL074C YFR010W-AP0C5N0 62 aa1.87□□□□□ -2.11
BRE1YDL074C RPL3P14126 387 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C STE18P18852 110 aa1.87□□□□□ -2.11
BRE1YDL074C ZRC1P20107 442 aa1.87□□□□□ -2.11
BRE1YDL074C DAL82P21705 255 aa1.87□□□□□ -2.11
BRE1YDL074C SCO1P23833 295 aa1.87□□□□□ -2.11
BRE1YDL074C PPA2P28239 310 aa1.87□□□□□ -2.11
BRE1YDL074C NRP1P32770 719 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
BRE1YDL074C ECM31P38122 312 aa1.87□□□□□ -2.11
BRE1YDL074C LEU5P38702 357 aa1.87□□□□□ -2.11
BRE1YDL074C RTC3P38804 111 aaPredicted RBP1.87□□□□□ -2.11
BRE1YDL074C GEP4P38812 185 aa1.87□□□□□ -2.11
BRE1YDL074C LSM12P38828 187 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C PTH1P38876 190 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C LNP1P38878 278 aa1.87□□□□□ -2.11
BRE1YDL074C GCV3P39726 170 aaPredicted RBP1.87□□□□□ -2.11
BRE1YDL074C SSO2P39926 295 aa1.87□□□□□ -2.11
BRE1YDL074C SHO1P40073 367 aa1.87□□□□□ -2.11
BRE1YDL074C CFD1P40558 293 aa1.87□□□□□ -2.11
BRE1YDL074C YPS6P40583 537 aa1.87□□□□□ -2.11
BRE1YDL074C GPP1P41277 250 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C GLR1P41921 483 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C OTU1P43558 301 aa1.87□□□□□ -2.11
BRE1YDL074C YJL016WP47072 561 aa1.87□□□□□ -2.11
BRE1YDL074C AVT4P50944 713 aa1.87□□□□□ -2.11
BRE1YDL074C ACS2P52910 683 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C BRR6P53062 197 aa1.87□□□□□ -2.11
BRE1YDL074C NIF3P53081 288 aa1.87□□□□□ -2.11
BRE1YDL074C PNC1P53184 216 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C YGR042WP53227 271 aa1.87□□□□□ -2.11
BRE1YDL074C FMP48P53233 369 aa1.87□□□□□ -2.11
BRE1YDL074C YGR126WP53274 230 aa1.87□□□□□ -2.11
BRE1YDL074C MPA43P53583 542 aaPredicted RBP1.87□□□□□ -2.11
BRE1YDL074C MRPL19P53875 158 aa1.87□□□□□ -2.11
BRE1YDL074C RSM10Q03201 203 aa1.87□□□□□ -2.11
BRE1YDL074C SEI1Q06058 285 aa1.87□□□□□ -2.11
BRE1YDL074C GAS2Q06135 555 aa1.87□□□□□ -2.11
BRE1YDL074C CTS2Q06350 511 aa1.87□□□□□ -2.11
BRE1YDL074C ANT1Q06497 328 aa1.87□□□□□ -2.11
BRE1YDL074C BDS1Q08347 646 aa1.87□□□□□ -2.11
BRE1YDL074C YOR376WQ08900 122 aa1.87□□□□□ -2.11
BRE1YDL074C YLR108CQ12259 485 aa1.87□□□□□ -2.11
BRE1YDL074C MCT1Q12283 360 aa1.87□□□□□ -2.11
BRE1YDL074C YRM1Q12340 786 aa1.87□□□□□ -2.11
BRE1YDL074C YDR034W-BQ6Q5X2 51 aa1.87□□□□□ -2.11
BRE1YDL074C UBA3Q99344 299 aa1.87□□□□□ -2.11
BRE1YDL074C RPS31P05759 152 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C UBI4P0CG63 381 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C RPL40AP0CH08 128 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C RPL40BP0CH09 128 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C FUS3P16892 353 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C CKS1P20486 150 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C RPB10P22139 70 aa1.87□□□□□ -2.11
BRE1YDL074C CPR2P23285 205 aa1.87□□□□□ -2.11
BRE1YDL074C YCR006CP25350 157 aa1.87□□□□□ -2.11
BRE1YDL074C MXR2P25566 168 aa1.87□□□□□ -2.11
BRE1YDL074C VMA5P31412 392 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C MRP20P32387 263 aa1.87□□□□□ -2.11
BRE1YDL074C HSP150P32478 413 aa1.87□□□□□ -2.11
BRE1YDL074C FMT1P32785 401 aa1.87□□□□□ -2.11
BRE1YDL074C YBL010CP32788 280 aa1.87□□□□□ -2.11
BRE1YDL074C CBT1P36038 271 aaPredicted RBP1.87□□□□□ -2.11
BRE1YDL074C MRPL16P38064 232 aa1.87□□□□□ -2.11
BRE1YDL074C UME6P39001 836 aa1.87□□□□□ -2.11
BRE1YDL074C PAM16P42949 149 aa1.87□□□□□ -2.11
BRE1YDL074C SNO3P43544 222 aa1.87□□□□□ -2.11
BRE1YDL074C HAM1P47119 197 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C OCA1P50946 238 aaPredicted RBP1.87□□□□□ -2.11
BRE1YDL074C PKP2P53170 491 aa1.87□□□□□ -2.11
BRE1YDL074C RNH201P53942 307 aa1.87□□□□□ -2.11
BRE1YDL074C GPI15P53961 229 aa1.87□□□□□ -2.11
BRE1YDL074C SDC1Q03323 175 aa1.87□□□□□ -2.11
BRE1YDL074C MDM30Q05930 598 aa1.87□□□□□ -2.11
BRE1YDL074C NMA1Q06178 401 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C RFU1Q08003 200 aa1.87□□□□□ -2.11
BRE1YDL074C YRA1Q12159 226 aaKnown RBP1.87□□□□□ -2.11
BRE1YDL074C YLR146W-AQ2V2P1 62 aa1.87□□□□□ -2.11
BRE1YDL074C TDH1P00360 332 aaKnown RBP1.86□□□□□ -2.11
BRE1YDL074C AAC1P04710 309 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms