RNA–Protein interactions for RNA: YCR084C

TUP1, Transcript of General repressor of transcription, yeast

Gene TUP1, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUP1	YCR084C	MRPL44	P19956	98 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YCR023C	P25351	611 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	ELO2	P25358	347 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	TAH1	P25638	111 aa	Predicted RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	YCR090C	P25654	182 aa	Known RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	FUB1	P25659	250 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	OCH1	P31755	480 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	SRY1	P36007	326 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YPT53	P36019	220 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YJL218W	P40892	196 aa	Known RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	SPG5	P42933	373 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	SET4	P42948	560 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	ATG18	P43601	500 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	CTK2	P46962	323 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	SNN1	P48232	102 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	COX18	P53239	316 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	GTR2	P53290	341 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
TUP1	YCR084C	OCA2	P53949	197 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	GIP3	Q03016	1276 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YOL131W	Q08270	108 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	TY1A-GR1	Q12085	440 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	AIM45	Q12480	344 aa	Known RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	YPL247C	Q12523	523 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YIR021W-A	Q3E739	70 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YPR014C	Q6B0W2	109 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	TY1A-OL	Q92392	440 aa	Known RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	IZH4	Q99393	312 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	CKS1	P20486	150 aa	Known RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	PDE1	P22434	369 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YHL044W	P38727	235 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YHR177W	P38867	453 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	MCM22	P47167	239 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	PRM8	P53174	237 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	MKC7	P53379	596 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	MPA43	P53583	542 aa	Predicted RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	MRPL22	P53881	309 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	YPL108W	Q02872	168 aa	Predicted RBP	4.6	□□□□□ -1.67
TUP1	YCR084C	TVP18	Q04767	167 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	AIM39	Q08223	395 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	SPC3	Q12133	184 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	RLM1	Q12224	676 aa		4.6	□□□□□ -1.67
TUP1	YCR084C	PHO2	P07269	559 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TUP1	YCR084C	NAR1	P23503	491 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	SGE1	P33335	543 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	SCD5	P34758	872 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	SSS1	P35179	80 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	APL3	P38065	1025 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	SLM6	P38343	150 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	YPT31	P38555	223 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	YHR127W	P38833	243 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	ERJ5	P43613	295 aa	Predicted RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	CHA4	P43634	648 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	MNN10	P50108	393 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	DUS1	P53759	423 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	LEE1	Q02799	301 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	GAS3	Q03655	524 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	YMR253C	Q04835	414 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	BNA5	Q05979	453 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	PRP11	Q07350	266 aa	Predicted RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	MED7	Q08278	222 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	RAX2	Q12465	1220 aa		4.59	□□□□□ -1.67
TUP1	YCR084C	MEX67	Q99257	599 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	HRP1	Q99383	534 aa	Known RBP	4.59	□□□□□ -1.67
TUP1	YCR084C	CYC3	P06182	269 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	PEP4	P07267	405 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	YCL002C	P25565	263 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	YCR102C	P25608	368 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	GAC1	P28006	793 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	PEX4	P29340	183 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	MTC7	P32633	139 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	COX13	P32799	129 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	YNK1	P36010	153 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	FRE2	P36033	711 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	YKL151C	P36059	337 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	YKR075C	P36155	307 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	PNT1	P38969	423 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	RRG9	P40156	214 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	FIS1	P40515	155 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	GLR1	P41921	483 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	PMT4	P46971	762 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	AVT1	P47082	602 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	MTR3	P48240	250 aa	Predicted RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	MPC1	P53157	130 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	YGL039W	P53183	348 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	CRZ1	P53968	678 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	LRS4	Q04087	347 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	YMR320W	Q04897	101 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	YHC1	Q05900	231 aa	Known RBP	4.58	□□□□□ -1.68
TUP1	YCR084C	STP4	Q07351	490 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	PLB3	Q08108	686 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	YLR049C	Q12110	428 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	SAM35	P14693	329 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	MRP49	P32388	137 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	STE14	P32584	239 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	MSN2	P33748	704 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	PRY2	P36110	329 aa		4.58	□□□□□ -1.68
TUP1	YCR084C	SOL2	P37262	315 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms