RNA–Protein interactions for RNA: YBR236C

ABD1, Transcript of Methyltransferase, yeast

Gene ABD1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABD1	YBR236C	RPE1	P46969	238 aa		3.21	□□□□□ -1.89
ABD1	YBR236C	RSM27	P53305	110 aa		3.21	□□□□□ -1.89
ABD1	YBR236C	CTR3	Q06686	241 aa		3.21	□□□□□ -1.89
ABD1	YBR236C	YOS9	Q99220	542 aa		3.21	□□□□□ -1.89
ABD1	YBR236C	PDR18	P53756	1333 aa		3.21	□□□□□ -1.9
ABD1	YBR236C	PHO88	P38264	188 aa	Predicted RBP	3.2	□□□□□ -1.9
ABD1	YBR236C	SCC4	P40090	624 aa		3.2	□□□□□ -1.9
ABD1	YBR236C	TIM21	P53220	239 aa		3.2	□□□□□ -1.9
ABD1	YBR236C	CDC14	Q00684	551 aa		3.2	□□□□□ -1.9
ABD1	YBR236C	COX20	Q04935	205 aa		3.2	□□□□□ -1.9
ABD1	YBR236C	KAP95	Q06142	861 aa	Known RBP	3.2	□□□□□ -1.9
ABD1	YBR236C	ARV1	Q06541	321 aa		3.2	□□□□□ -1.9
ABD1	YBR236C	ERG2	P32352	222 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	SMC2	P38989	1170 aa	Known RBP	3.19	□□□□□ -1.9
ABD1	YBR236C	YJL118W	P47022	219 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	FMP41	P53889	259 aa	Known RBP	3.19	□□□□□ -1.9
ABD1	YBR236C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
ABD1	YBR236C	YDR114C	Q04597	100 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	YPL150W	Q12152	901 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	DUR1,2	P32528	1835 aa	Known RBP	3.19	□□□□□ -1.9
ABD1	YBR236C	HIS1	P00498	297 aa	Known RBP	3.19	□□□□□ -1.9
ABD1	YBR236C	NPT1	P39683	429 aa	Known RBP	3.19	□□□□□ -1.9
ABD1	YBR236C	SER33	P40510	469 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	MNT4	P53745	580 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	SDC1	Q03323	175 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	OST6	Q03723	332 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	TVP15	Q03860	143 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	ATC1	Q04005	294 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	ATG5	Q12380	294 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	MRX4	Q12467	430 aa		3.19	□□□□□ -1.9
ABD1	YBR236C	MRP1	P10662	321 aa	Known RBP	3.18	□□□□□ -1.9
ABD1	YBR236C	IME2	P32581	645 aa		3.18	□□□□□ -1.9
ABD1	YBR236C	ALK2	P32789	676 aa	Predicted RBP	3.18	□□□□□ -1.9
ABD1	YBR236C	TRM7	P38238	310 aa	Known RBP	3.18	□□□□□ -1.9
ABD1	YBR236C	DDI1	P40087	428 aa		3.18	□□□□□ -1.9
ABD1	YBR236C	ALG9	P53868	555 aa	Known RBP	3.18	□□□□□ -1.9
ABD1	YBR236C	YMR321C	Q04898	105 aa		3.18	□□□□□ -1.9
ABD1	YBR236C	LOA1	Q06508	300 aa		3.18	□□□□□ -1.9
ABD1	YBR236C	PRR2	Q12310	699 aa		3.18	□□□□□ -1.9
ABD1	YBR236C	COX2	P00410	251 aa		3.17	□□□□□ -1.9
ABD1	YBR236C	COQ1	P18900	473 aa		3.17	□□□□□ -1.9
ABD1	YBR236C	YUH1	P35127	236 aa		3.17	□□□□□ -1.9
ABD1	YBR236C	YHI9	P38765	294 aa		3.17	□□□□□ -1.9
ABD1	YBR236C	SPO73	P40031	143 aa		3.17	□□□□□ -1.9
ABD1	YBR236C	RFM1	Q12192	310 aa		3.17	□□□□□ -1.9
ABD1	YBR236C	RPL4A	P10664	362 aa	Known RBP	3.16	□□□□□ -1.9
ABD1	YBR236C	DRE2	P36152	348 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	TVP23	P38962	199 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	PRM9	P39551	298 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	YJR012C	P47087	207 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	RPL4B	P49626	362 aa	Known RBP	3.16	□□□□□ -1.9
ABD1	YBR236C	HSH155	P49955	971 aa	Known RBP	3.16	□□□□□ -1.9
ABD1	YBR236C	MIG2	P53035	382 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	YNL095C	P53932	642 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	ALG11	P53954	548 aa	Known RBP	3.16	□□□□□ -1.9
ABD1	YBR236C	ADH6	Q04894	360 aa	Known RBP	3.16	□□□□□ -1.9
ABD1	YBR236C	SUE1	Q06524	206 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	BTS1	Q12051	335 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	SME1	Q12330	94 aa	Predicted RBP	3.16	□□□□□ -1.9
ABD1	YBR236C	AI5_BETA	Q9ZZX0	354 aa		3.16	□□□□□ -1.9
ABD1	YBR236C	YPR096C	O13587	100 aa		3.15	□□□□□ -1.91
ABD1	YBR236C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
ABD1	YBR236C	SWS2	P53937	143 aa		3.15	□□□□□ -1.91
ABD1	YBR236C	RRT8	Q08219	342 aa		3.15	□□□□□ -1.91
ABD1	YBR236C	YOL107W	Q12239	342 aa		3.15	□□□□□ -1.91
ABD1	YBR236C	ECM29	P38737	1868 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	YEL009C-A	A0A023PZF2	135 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	MET2	P08465	486 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	RSR1	P13856	272 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	POL30	P15873	258 aa	Known RBP	3.14	□□□□□ -1.91
ABD1	YBR236C	DAL82	P21705	255 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	HMT1	P38074	348 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	ARN2	P38724	620 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	SUR2	P38992	349 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	HMF1	P40037	129 aa	Known RBP	3.14	□□□□□ -1.91
ABD1	YBR236C	YAR1	P46683	200 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	NBP35	P52920	328 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	MAL13	P53338	473 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	YPL039W	Q03080	316 aa		3.14	□□□□□ -1.91
ABD1	YBR236C	RRT12	P25381	491 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	CSG2	P35206	410 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	TVP38	P36164	337 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	YJL144W	P47009	104 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	SLX9	P53251	210 aa	Predicted RBP	3.13	□□□□□ -1.91
ABD1	YBR236C	PEX10	Q05568	337 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	CTS2	Q06350	511 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	TIM22	Q12328	207 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	ISD11	Q6Q560	94 aa		3.13	□□□□□ -1.91
ABD1	YBR236C	ZWF1	P11412	505 aa	Known RBP	3.12	□□□□□ -1.91
ABD1	YBR236C	MAK31	P23059	88 aa		3.12	□□□□□ -1.91
ABD1	YBR236C	BMH1	P29311	267 aa	Known RBP	3.12	□□□□□ -1.91
ABD1	YBR236C	MOB1	P40484	314 aa		3.12	□□□□□ -1.91
ABD1	YBR236C	RPL10	P41805	221 aa	Known RBP	3.12	□□□□□ -1.91
ABD1	YBR236C	NBP1	P52919	319 aa	Predicted RBP	3.12	□□□□□ -1.91
ABD1	YBR236C	YGL088W	P53151	121 aa		3.12	□□□□□ -1.91
ABD1	YBR236C	YNL134C	P53912	376 aa	Known RBP	3.12	□□□□□ -1.91
ABD1	YBR236C	YOL019W	Q08157	551 aa		3.12	□□□□□ -1.91
ABD1	YBR236C	UBR2	Q07963	1872 aa		3.11	□□□□□ -1.91
ABD1	YBR236C	MSF1	P08425	469 aa		3.11	□□□□□ -1.91
ABD1	YBR236C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms