RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W YET3Q07451 203 aa2.44□□□□□ -2.02
SWD3YBR175W SNA4Q07549 140 aa2.44□□□□□ -2.02
SWD3YBR175W RRP40Q08285 240 aaKnown RBP2.44□□□□□ -2.02
SWD3YBR175W SRL1Q08673 210 aa2.44□□□□□ -2.02
SWD3YBR175W YOR292CQ08743 309 aa2.44□□□□□ -2.02
SWD3YBR175W YPL150WQ12152 901 aa2.44□□□□□ -2.02
SWD3YBR175W TPO4Q12256 659 aa2.44□□□□□ -2.02
SWD3YBR175W TOP2P06786 1428 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W TRM3Q07527 1436 aa2.43□□□□□ -2.02
SWD3YBR175W PUT1P09368 476 aa2.43□□□□□ -2.02
SWD3YBR175W RPS8AP0CX39 200 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W RPS8BP0CX40 200 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W SNA3P14359 133 aa2.43□□□□□ -2.02
SWD3YBR175W YCR025CP25352 136 aa2.43□□□□□ -2.02
SWD3YBR175W TRR1P29509 319 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W CAM1P29547 415 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W CSE2P33308 149 aa2.43□□□□□ -2.02
SWD3YBR175W SHG1P38337 142 aa2.43□□□□□ -2.02
SWD3YBR175W MDM31P38880 579 aa2.43□□□□□ -2.02
SWD3YBR175W SEN34P39707 275 aa2.43□□□□□ -2.02
SWD3YBR175W ATG18P43601 500 aa2.43□□□□□ -2.02
SWD3YBR175W YJR054WP47114 497 aa2.43□□□□□ -2.02
SWD3YBR175W SDS23P53172 527 aa2.43□□□□□ -2.02
SWD3YBR175W CRH1P53301 507 aa2.43□□□□□ -2.02
SWD3YBR175W YNL140CP53910 189 aa2.43□□□□□ -2.02
SWD3YBR175W YLR460CP54007 376 aa2.43□□□□□ -2.02
SWD3YBR175W SNO1Q03144 224 aa2.43□□□□□ -2.02
SWD3YBR175W ADD37Q03233 198 aa2.43□□□□□ -2.02
SWD3YBR175W SEI1Q06058 285 aa2.43□□□□□ -2.02
SWD3YBR175W YPR147CQ06522 304 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W ARR2Q06597 130 aa2.43□□□□□ -2.02
SWD3YBR175W BRX1Q08235 291 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W YNG1Q08465 219 aa2.43□□□□□ -2.02
SWD3YBR175W HNT3Q08702 217 aa2.43□□□□□ -2.02
SWD3YBR175W WTM1Q12363 437 aaKnown RBP2.43□□□□□ -2.02
SWD3YBR175W NAG1Q8TGN9 163 aa2.43□□□□□ -2.02
SWD3YBR175W TY1B-BRQ12193 1756 aa2.43□□□□□ -2.02
SWD3YBR175W TY1B-GR3Q12316 1755 aa2.43□□□□□ -2.02
SWD3YBR175W TY1B-ORQ92393 1755 aa2.43□□□□□ -2.02
SWD3YBR175W MMS22Q06164 1454 aa2.42□□□□□ -2.02
SWD3YBR175W ASP3-2P0CX77 362 aa2.42□□□□□ -2.02
SWD3YBR175W ASP3-3P0CX78 362 aa2.42□□□□□ -2.02
SWD3YBR175W ASP3-4P0CX79 362 aa2.42□□□□□ -2.02
SWD3YBR175W ASP3-1P0CZ17 362 aa2.42□□□□□ -2.02
SWD3YBR175W ZWF1P11412 505 aaKnown RBP2.42□□□□□ -2.02
SWD3YBR175W GCY1P14065 312 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
SWD3YBR175W DBF2P22204 572 aa2.42□□□□□ -2.02
SWD3YBR175W MEI4P29467 408 aa2.42□□□□□ -2.02
SWD3YBR175W SRY1P36007 326 aa2.42□□□□□ -2.02
SWD3YBR175W CAF4P36130 643 aa2.42□□□□□ -2.02
SWD3YBR175W MRPL39P36533 70 aa2.42□□□□□ -2.02
SWD3YBR175W FRM2P37261 193 aa2.42□□□□□ -2.02
SWD3YBR175W SHE1P38200 338 aa2.42□□□□□ -2.02
SWD3YBR175W FIG1P38224 298 aa2.42□□□□□ -2.02
SWD3YBR175W YHL049CP38722 271 aa2.42□□□□□ -2.02
SWD3YBR175W COG3P40094 801 aa2.42□□□□□ -2.02
SWD3YBR175W YMR144WP40214 342 aaKnown RBP2.42□□□□□ -2.02
SWD3YBR175W AVT7P40501 490 aa2.42□□□□□ -2.02
SWD3YBR175W GAB1P41733 394 aa2.42□□□□□ -2.02
SWD3YBR175W CPR7P47103 393 aa2.42□□□□□ -2.02
SWD3YBR175W BIR1P47134 954 aa2.42□□□□□ -2.02
SWD3YBR175W TOS8P53147 276 aa2.42□□□□□ -2.02
SWD3YBR175W YGR015CP53208 328 aa2.42□□□□□ -2.02
SWD3YBR175W GTR2P53290 341 aa2.42□□□□□ -2.02
SWD3YBR175W PDR17P53844 350 aa2.42□□□□□ -2.02
SWD3YBR175W FMP41P53889 259 aaKnown RBP2.42□□□□□ -2.02
SWD3YBR175W YLR177WQ06251 628 aa2.42□□□□□ -2.02
SWD3YBR175W DXO1Q06349 442 aa2.42□□□□□ -2.02
SWD3YBR175W YOR376WQ08900 122 aa2.42□□□□□ -2.02
SWD3YBR175W YPL278CQ08990 100 aa2.42□□□□□ -2.02
SWD3YBR175W MRX4Q12467 430 aa2.42□□□□□ -2.02
SWD3YBR175W YCL021W-AQ96VH3 125 aa2.42□□□□□ -2.02
SWD3YBR175W COX5AP00424 153 aa2.41□□□□□ -2.02
SWD3YBR175W MET2P08465 486 aa2.41□□□□□ -2.02
SWD3YBR175W YOL163WP0CF20 169 aa2.41□□□□□ -2.02
SWD3YBR175W BGL2P15703 313 aaKnown RBP2.41□□□□□ -2.02
SWD3YBR175W SDH3P33421 198 aa2.41□□□□□ -2.02
SWD3YBR175W DBP7P36120 742 aaKnown RBP2.41□□□□□ -2.02
SWD3YBR175W DRE2P36152 348 aa2.41□□□□□ -2.02
SWD3YBR175W YER186CP40101 306 aa2.41□□□□□ -2.02
SWD3YBR175W YJL016WP47072 561 aa2.41□□□□□ -2.02
SWD3YBR175W SYF2P53277 215 aaPredicted RBP2.41□□□□□ -2.02
SWD3YBR175W NRK1P53915 240 aa2.41□□□□□ -2.02
SWD3YBR175W USB1Q12208 290 aaKnown RBP2.41□□□□□ -2.02
SWD3YBR175W JID1Q12350 301 aa2.41□□□□□ -2.02
SWD3YBR175W IZH2Q12442 317 aa2.41□□□□□ -2.02
SWD3YBR175W ULS1Q08562 1619 aa2.41□□□□□ -2.02
SWD3YBR175W CDC28P00546 298 aaKnown RBP2.4□□□□□ -2.03
SWD3YBR175W CPT1P17898 393 aa2.4□□□□□ -2.03
SWD3YBR175W YPT52P36018 234 aaKnown RBP2.4□□□□□ -2.03
SWD3YBR175W MRPL28P36527 147 aa2.4□□□□□ -2.03
SWD3YBR175W ECM13P38195 257 aa2.4□□□□□ -2.03
SWD3YBR175W PTH1P38876 190 aaKnown RBP2.4□□□□□ -2.03
SWD3YBR175W SEO1P39709 593 aa2.4□□□□□ -2.03
SWD3YBR175W YIL012WP40551 113 aa2.4□□□□□ -2.03
SWD3YBR175W MEP2P41948 499 aa2.4□□□□□ -2.03
SWD3YBR175W STB1P42845 420 aa2.4□□□□□ -2.03
SWD3YBR175W YJR056CP47115 236 aa2.4□□□□□ -2.03
SWD3YBR175W BXI1P48558 297 aa2.4□□□□□ -2.03
SWD3YBR175W MRH4P53166 561 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms