RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 YMR279CQ03263 540 aa7.73□□□□□ -1.17
LSR1LSR1 AGE1Q04412 482 aa7.73□□□□□ -1.17
LSR1LSR1 MDM30Q05930 598 aa7.73□□□□□ -1.17
LSR1LSR1 DAP1Q12091 152 aa7.73□□□□□ -1.17
LSR1LSR1 PET20Q99373 253 aa7.73□□□□□ -1.17
LSR1LSR1 TY1A-DR4O74302 440 aa7.72□□□□□ -1.17
LSR1LSR1 RPS31P05759 152 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 UBI4P0CG63 381 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 RPL40AP0CH08 128 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 RPL40BP0CH09 128 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 TY1A-AP0CX57 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-PR1P0CX58 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-ORP0CX59 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-PR2P0CX60 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-DR5P0CX65 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-ER2P0CX66 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-GR3P0CX67 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-LR1P0CX68 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-MR2P0CX69 440 aa7.72□□□□□ -1.17
LSR1LSR1 CTA1P15202 515 aa7.72□□□□□ -1.17
LSR1LSR1 APA2P22108 325 aa7.72□□□□□ -1.17
LSR1LSR1 ADH7P25377 361 aa7.72□□□□□ -1.17
LSR1LSR1 HSP150P32478 413 aa7.72□□□□□ -1.17
LSR1LSR1 AGA2P32781 87 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-JR2P47099 440 aa7.72□□□□□ -1.17
LSR1LSR1 UBP8P50102 471 aa7.72□□□□□ -1.17
LSR1LSR1 YGL117WP53133 265 aa7.72□□□□□ -1.17
LSR1LSR1 ACT1P60010 375 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 SNP1Q00916 300 aaPredicted RBP7.72□□□□□ -1.17
LSR1LSR1 YMR210WQ03649 449 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-DR1Q03856 440 aa7.72□□□□□ -1.17
LSR1LSR1 RVB1Q03940 463 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 LRS4Q04087 347 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 TY1A-ML1Q04706 440 aaKnown RBP7.72□□□□□ -1.17
LSR1LSR1 NNT1Q05874 261 aa7.72□□□□□ -1.17
LSR1LSR1 SEI1Q06058 285 aa7.72□□□□□ -1.17
LSR1LSR1 FCF2Q12035 217 aaPredicted RBP7.72□□□□□ -1.17
LSR1LSR1 YPR063CQ12160 140 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-BRQ12217 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-NL2Q12470 440 aa7.72□□□□□ -1.17
LSR1LSR1 TY1A-GR2Q12485 440 aa7.72□□□□□ -1.17
LSR1LSR1 Q0142Q9ZZW4 58 aa7.72□□□□□ -1.17
LSR1LSR1 NAM2P11325 894 aa7.71□□□□□ -1.18
LSR1LSR1 SCO1P23833 295 aa7.71□□□□□ -1.18
LSR1LSR1 SED4P25365 1065 aa7.71□□□□□ -1.18
LSR1LSR1 VMA5P31412 392 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 SIP1P32578 815 aa7.71□□□□□ -1.18
LSR1LSR1 POP8P38208 133 aa7.71□□□□□ -1.18
LSR1LSR1 IMD2P38697 523 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 RPL13BP40212 199 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 PUS4P48567 403 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 PNC1P53184 216 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 FMP41P53889 259 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 YRA1Q12159 226 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 MCT1Q12283 360 aa7.71□□□□□ -1.18
LSR1LSR1 RPL13AQ12690 199 aaPredicted RBP7.71□□□□□ -1.18
LSR1LSR1 BRR2P32639 2163 aaKnown RBP7.71□□□□□ -1.18
LSR1LSR1 ARF1P11076 181 aaKnown RBP7.7□□□□□ -1.18
LSR1LSR1 MEK1P24719 497 aaPredicted RBP7.7□□□□□ -1.18
LSR1LSR1 YCR006CP25350 157 aa7.7□□□□□ -1.18
LSR1LSR1 FAA1P30624 700 aaKnown RBP7.7□□□□□ -1.18
LSR1LSR1 MSK1P32048 576 aa7.7□□□□□ -1.18
LSR1LSR1 VAM7P32912 316 aa7.7□□□□□ -1.18
LSR1LSR1 DLS1P40366 167 aa7.7□□□□□ -1.18
LSR1LSR1 EMC5P40540 141 aa7.7□□□□□ -1.18
LSR1LSR1 HXT14P42833 540 aa7.7□□□□□ -1.18
LSR1LSR1 QRI1P43123 477 aaKnown RBP7.7□□□□□ -1.18
LSR1LSR1 ERJ5P43613 295 aaPredicted RBP7.7□□□□□ -1.18
LSR1LSR1 MRPL22P53881 309 aa7.7□□□□□ -1.18
LSR1LSR1 NIS1P53939 407 aa7.7□□□□□ -1.18
LSR1LSR1 SAM50P53969 484 aa7.7□□□□□ -1.18
LSR1LSR1 YCL001W-AP87012 153 aa7.7□□□□□ -1.18
LSR1LSR1 HNT1Q04344 158 aaKnown RBP7.7□□□□□ -1.18
LSR1LSR1 BNA5Q05979 453 aa7.7□□□□□ -1.18
LSR1LSR1 MIM1Q08176 113 aa7.7□□□□□ -1.18
LSR1LSR1 MCH4Q08268 501 aa7.7□□□□□ -1.18
LSR1LSR1 WHI5Q12416 295 aa7.7□□□□□ -1.18
LSR1LSR1 TAD3Q9URQ3 322 aa7.7□□□□□ -1.18
LSR1LSR1 NUD1P32336 851 aa7.69□□□□□ -1.18
LSR1LSR1 YBL010CP32788 280 aa7.69□□□□□ -1.18
LSR1LSR1 UMP1P38293 148 aa7.69□□□□□ -1.18
LSR1LSR1 ERV15P38312 142 aa7.69□□□□□ -1.18
LSR1LSR1 OM14P38325 134 aa7.69□□□□□ -1.18
LSR1LSR1 FMO1P38866 432 aa7.69□□□□□ -1.18
LSR1LSR1 YJL193WP39542 402 aa7.69□□□□□ -1.18
LSR1LSR1 SHR5P41912 237 aa7.69□□□□□ -1.18
LSR1LSR1 SNO3P43544 222 aa7.69□□□□□ -1.18
LSR1LSR1 FIT1Q04433 528 aa7.69□□□□□ -1.18
LSR1LSR1 YPR147CQ06522 304 aaKnown RBP7.69□□□□□ -1.18
LSR1LSR1 BER1Q06688 274 aaKnown RBP7.69□□□□□ -1.18
LSR1LSR1 IRC19Q07843 230 aa7.69□□□□□ -1.18
LSR1LSR1 AIM17P23180 465 aaKnown RBP7.68□□□□□ -1.18
LSR1LSR1 MRPL15P36523 253 aa7.68□□□□□ -1.18
LSR1LSR1 FRM2P37261 193 aa7.68□□□□□ -1.18
LSR1LSR1 CFD1P40558 293 aa7.68□□□□□ -1.18
LSR1LSR1 YIR035CP40579 254 aa7.68□□□□□ -1.18
LSR1LSR1 SPG5P42933 373 aa7.68□□□□□ -1.18
LSR1LSR1 AGX1P43567 385 aa7.68□□□□□ -1.18
LSR1LSR1 AAH1P53909 347 aa7.68□□□□□ -1.18
LSR1LSR1 APJ1P53940 528 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms