RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 TOM1L1O75674 476 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 URODP06132 367 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 IGFBP6P24592 240 aaPredicted RBP16.16■□□□□ 0.18
USE1-205ENST00000594724 NMT1P30419 496 aaKnown RBP16.16■□□□□ 0.18
USE1-205ENST00000594724 MATR3P43243 847 aaKnown RBP eCLIP16.16■□□□□ 0.18
USE1-205ENST00000594724 GLUD2P49448 558 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 YARSP54577 528 aaKnown RBP16.16■□□□□ 0.18
USE1-205ENST00000594724 KIAA1841Q6NSI8 718 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 ALKAL1Q6UXT8 129 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 SV2BQ7L1I2 683 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 PDILTQ8N807 584 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 BICD1Q96G01 975 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 ACAP3Q96P50 834 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 PPP1R10Q96QC0 940 aaKnown RBP16.16■□□□□ 0.18
USE1-205ENST00000594724 HAPLN2Q9GZV7 340 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 EPHX3Q9H6B9 360 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 CDH22Q9UJ99 828 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 MYH11P35749 1972 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 C5orf42Q9H799 3197 aa16.16■□□□□ 0.18
USE1-205ENST00000594724 CLDN3O15551 220 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 PPP6R2O75170 966 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 KIF4AO95239 1232 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 BRD1O95696 1058 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
USE1-205ENST00000594724 HOXB8P17481 243 aaPredicted RBP16.15■□□□□ 0.18
USE1-205ENST00000594724 DSG1Q02413 1049 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 USP41Q3LFD5 358 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 ZPBP2Q6X784 338 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 CCDC73Q6ZRK6 1079 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 SUSD6Q92537 303 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 DDX12PQ92771 950 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 FIZ1Q96SL8 496 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 GOLGA2P5Q9HBQ8 144 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 TOPORSQ9NS56 1045 aaPredicted RBP16.15■□□□□ 0.18
USE1-205ENST00000594724 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 TBX20Q9UMR3 447 aa16.15■□□□□ 0.18
USE1-205ENST00000594724 TEX28O15482 410 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 MEFVO15553 781 aaPredicted RBP16.14■□□□□ 0.17
USE1-205ENST00000594724 YEATS4O95619 227 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 WEE2P0C1S8 567 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 STAT6P42226 847 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 LIG4P49917 911 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 CLCN4P51793 760 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 CLCNKBP51801 687 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 SOX4Q06945 474 aaPredicted RBP16.14■□□□□ 0.17
USE1-205ENST00000594724 MCL1Q07820 350 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 NOLC1Q14978 699 aaKnown RBP eCLIP16.14■□□□□ 0.17
USE1-205ENST00000594724 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 ZC2HC1CQ53FD0 456 aaPredicted RBP16.14■□□□□ 0.17
USE1-205ENST00000594724 XKR4Q5GH76 650 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 RARS2Q5T160 578 aaKnown RBP16.14■□□□□ 0.17
USE1-205ENST00000594724 PPFIBP1Q86W92 1011 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 SFR1Q86XK3 245 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 FEZF2Q8TBJ5 459 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 RIN2Q8WYP3 895 aaPredicted RBP16.14■□□□□ 0.17
USE1-205ENST00000594724 ZMAT2Q96NC0 199 aaKnown RBP16.14■□□□□ 0.17
USE1-205ENST00000594724 RXFP1Q9HBX9 757 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 SSX2IPQ9Y2D8 614 aa16.14■□□□□ 0.17
USE1-205ENST00000594724 MYBP10242 640 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 RPL17P18621 184 aaKnown RBP16.13■□□□□ 0.17
USE1-205ENST00000594724 GTF2BQ00403 316 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 CBX2Q14781 532 aaPredicted RBP16.13■□□□□ 0.17
USE1-205ENST00000594724 SLC10A6Q3KNW5 377 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 FAM171A1Q5VUB5 890 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 PRSS55Q6UWB4 352 aaPredicted RBP16.13■□□□□ 0.17
USE1-205ENST00000594724 CEP57Q86XR8 500 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 GLYCTKQ8IVS8 523 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 STAMQ92783 540 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 KCNN1Q92952 543 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 DNAJC19Q96DA6 116 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 SNX27Q96L92 541 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 FBXL18Q96ME1 805 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 PHF7Q9BWX1 381 aaPredicted RBP16.13■□□□□ 0.17
USE1-205ENST00000594724 ADAM7Q9H2U9 754 aa16.13■□□□□ 0.17
USE1-205ENST00000594724 SF3B1O75533 1304 aaKnown RBP eCLIP16.13■□□□□ 0.17
USE1-205ENST00000594724 HNRNPDLO14979 420 aaKnown RBP16.12■□□□□ 0.17
USE1-205ENST00000594724 CUTAO60888 179 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 ADH1AP07327 375 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 TNFSF9P41273 254 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
USE1-205ENST00000594724 ITIH3Q06033 890 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 RTP2Q5QGT7 225 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 AXDND1Q5T1B0 1012 aaPredicted RBP16.12■□□□□ 0.17
USE1-205ENST00000594724 CES5AQ6NT32 575 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 SLC39A4Q6P5W5 647 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 DCLRE1AQ6PJP8 1040 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 SHC4Q6S5L8 630 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 CD300LGQ6UXG3 332 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 TMC5Q6UXY8 1006 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 PALB2Q86YC2 1186 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 C3orf58Q8NDZ4 430 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 C18orf25Q96B23 403 aaPredicted RBP16.12■□□□□ 0.17
USE1-205ENST00000594724 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 POP1Q99575 1024 aaKnown RBP16.12■□□□□ 0.17
USE1-205ENST00000594724 IKZF4Q9H2S9 585 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 TBC1D7Q9P0N9 293 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 CNTN3Q9P232 1028 aa16.12■□□□□ 0.17
USE1-205ENST00000594724 MYH15Q9Y2K3 1946 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms