RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 C2CD2LO14523 706 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 SLC37A4O43826 429 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 DGAT1O75907 488 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 DDHD2O94830 711 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 LARGE1O95461 756 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 HOXA11P31270 313 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-226ENST00000591534 NBL1P41271 181 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 GLUD2P49448 558 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 NCAPH2Q6IBW4 605 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 GPR65Q8IYL9 337 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 TMEM105Q8N8V8 129 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 NKD2Q969F2 451 aaPredicted RBP10.47□□□□□ -0.73
BRCA1-226ENST00000591534 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 HERC2P3Q9BVR0 1158 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 PLEKHA4Q9H4M7 779 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 KCNK12Q9HB15 430 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 MAN1C1Q9NR34 630 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.47□□□□□ -0.73
BRCA1-226ENST00000591534 CDH22Q9UJ99 828 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 DUSP12Q9UNI6 340 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 GIT1Q9Y2X7 761 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 STK36Q9NRP7 1315 aa10.47□□□□□ -0.73
BRCA1-226ENST00000591534 ZDBF2Q9HCK1 2354 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 USP34Q70CQ2 3546 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 CCDC195A0A1B0GUA6 201 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 ARL5CA6NH57 179 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 MEIS3P2A8K0S8 358 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 AOC1P19801 751 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 GBP2P32456 591 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-226ENST00000591534 PTENP60484 403 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 SCRN1Q12765 414 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 CRTC2Q53ET0 693 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-226ENST00000591534 PIK3AP1Q6ZUJ8 805 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 TPH2Q8IWU9 490 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 BCL7CQ8WUZ0 217 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-226ENST00000591534 SNX21Q969T3 373 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 SNX27Q96L92 541 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 IPO9Q96P70 1041 aaKnown RBP10.46□□□□□ -0.73
BRCA1-226ENST00000591534 CSRNP2Q9H175 543 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 SEMA4AQ9H3S1 761 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 PIDD1Q9HB75 910 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 WDR6Q9NNW5 1121 aaKnown RBP10.46□□□□□ -0.73
BRCA1-226ENST00000591534 ANKEF1Q9NU02 776 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.46□□□□□ -0.737e-7■□□□□ 9.9
BRCA1-226ENST00000591534 WNT16Q9UBV4 365 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 TPCN1Q9ULQ1 816 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 PCDHA12Q9UN75 941 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 KCNJ14Q9UNX9 436 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 PRG3Q9Y2Y8 225 aaPredicted RBP10.46□□□□□ -0.73
BRCA1-226ENST00000591534 IPPQ9Y573 584 aa10.46□□□□□ -0.73
BRCA1-226ENST00000591534 ZMYM2Q9UBW7 1377 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 INPPL1O15357 1258 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 TEX28O15482 410 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 TSPAN1O60635 241 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 LYPLA2O95372 231 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 KRT2P35908 639 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 GGCXP38435 758 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 MLH1P40692 756 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 RAB15P59190 212 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 DSG1Q02413 1049 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 CYP4A11Q02928 519 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 TRIM29Q14134 588 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 NPY5RQ15761 445 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 USP41Q3LFD5 358 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 UBXN11Q5T124 520 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 KANK3Q6NY19 840 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 SLC27A1Q6PCB7 646 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 COLGALT2Q8IYK4 626 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 SIX5Q8N196 739 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 SMG7Q92540 1137 aaKnown RBP10.45□□□□□ -0.74
BRCA1-226ENST00000591534 ZNF592Q92610 1267 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 DYDC2Q96IM9 177 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 GAD1Q99259 594 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 VN1R3Q9BXE9 311 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 NFKBIZQ9BYH8 718 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 MINDY3Q9H8M7 445 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 RXFP1Q9HBX9 757 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 GJB4Q9NTQ9 266 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 ZDHHC7Q9NXF8 308 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 EPS15L1Q9UBC2 864 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 ZMIZ1Q9ULJ6 1067 aa10.45□□□□□ -0.74
BRCA1-226ENST00000591534 ZFP37Q9Y6Q3 630 aaPredicted RBP10.45□□□□□ -0.74
BRCA1-226ENST00000591534 CLUHO75153 1309 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 PRR23AA6NEV1 266 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 TADA2AO75478 443 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 CTDNEP1O95476 244 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 HSP90AA1P07900 732 aaKnown RBP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 XRCC6P12956 609 aaKnown RBP eCLIP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 DSC1Q08554 894 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 CTTNQ14247 550 aaKnown RBP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 CALCRLQ16602 461 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 OXLD1Q5BKU9 147 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 KIAA0319Q5VV43 1072 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 PDXDC1Q6P996 788 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 CCDC105Q8IYK2 499 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 SMG8Q8ND04 991 aaKnown RBP10.44□□□□□ -0.74
BRCA1-226ENST00000591534 STK32AQ8WU08 396 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 HAS1Q92839 578 aa10.44□□□□□ -0.74
BRCA1-226ENST00000591534 PRIMPOLQ96LW4 560 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms