RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SPTLC2O15270 562 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 TRAK2O60296 914 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 LILRB3O75022 631 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 EFEMP2O95967 443 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 ZNF131P52739 623 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 NOLC1Q14978 699 aaKnown RBP eCLIP22.36■■□□□ 1.17
SS18-224ENST00000584083 USP41Q3LFD5 358 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 CES5AQ6NT32 575 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 CCDC73Q6ZRK6 1079 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 DYMQ7RTS9 669 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 RNF168Q8IYW5 571 aaPredicted RBP22.36■■□□□ 1.17
SS18-224ENST00000584083 LINC00301Q8NCQ3 95 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 HASPINQ8TF76 798 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 KHSRPQ92945 711 aaKnown RBP eCLIP22.36■■□□□ 1.173e-7■■■■□ 20.8
SS18-224ENST00000584083 B3GALT6Q96L58 329 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 DZANK1Q9NVP4 752 aa22.36■■□□□ 1.17
SS18-224ENST00000584083 SF3B1O75533 1304 aaKnown RBP eCLIP22.35■■□□□ 1.172e-6■■■■■ 90.5
SS18-224ENST00000584083 C19orf67A6NJJ6 358 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 SPDYE4A6NLX3 237 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 ABLIM1O14639 778 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 CLDN3O15551 220 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 BRD1O95696 1058 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 SCP2P22307 547 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 STAT6P42226 847 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 DSG1Q02413 1049 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 NAB2Q15742 525 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 KIAA0319Q5VV43 1072 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 SV2BQ7L1I2 683 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 SUSD6Q92537 303 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 PPP1R10Q96QC0 940 aaKnown RBP22.35■■□□□ 1.17
SS18-224ENST00000584083 EPHX3Q9H6B9 360 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 TBX20Q9UMR3 447 aa22.35■■□□□ 1.17
SS18-224ENST00000584083 SMIM28A0A1B0GU29 152 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 KIF4AO95239 1232 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 F13A1P00488 732 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 ADH1AP07327 375 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 LIG4P49917 911 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 CBX2Q14781 532 aaPredicted RBP22.34■■□□□ 1.17
SS18-224ENST00000584083 RARS2Q5T160 578 aaKnown RBP22.34■■□□□ 1.17
SS18-224ENST00000584083 C12orf76Q8N812 135 aaPredicted RBP22.34■■□□□ 1.17
SS18-224ENST00000584083 RIN2Q8WYP3 895 aaPredicted RBP22.34■■□□□ 1.17
SS18-224ENST00000584083 PHF7Q9BWX1 381 aaPredicted RBP22.34■■□□□ 1.17
SS18-224ENST00000584083 CHST7Q9NS84 486 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 MUC3AQ02505 3323 aa22.34■■□□□ 1.17
SS18-224ENST00000584083 PLXNA3P51805 1871 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 TEX28O15482 410 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 PPP6R2O75170 966 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 YEATS4O95619 227 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 CLCN4P51793 760 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 ITIH3Q06033 890 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 SEZ6Q53EL9 994 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 FAM171A1Q5VUB5 890 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 ALKAL1Q6UXT8 129 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 PDILTQ8N807 584 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 DDX12PQ92771 950 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 RPGRIP1Q96KN7 1286 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 SNX27Q96L92 541 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 FBXL18Q96ME1 805 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 ADAM7Q9H2U9 754 aa22.33■■□□□ 1.17
SS18-224ENST00000584083 MYMKA6NI61 221 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 HNRNPDLO14979 420 aaKnown RBP22.32■■□□□ 1.16
SS18-224ENST00000584083 B3GAT3O94766 335 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 NMT1P30419 496 aaKnown RBP22.32■■□□□ 1.16
SS18-224ENST00000584083 ABCD1P33897 745 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 MCL1Q07820 350 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 PKP1Q13835 747 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 XKR4Q5GH76 650 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 KANK3Q6NY19 840 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 CEP57Q86XR8 500 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 KCNN1Q92952 543 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 UROC1Q96N76 676 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 RXFP1Q9HBX9 757 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.32■■□□□ 1.16
SS18-224ENST00000584083 SLC38A7Q9NVC3 462 aa22.32■■□□□ 1.16
SS18-224ENST00000584083 PDCD11Q14690 1871 aaKnown RBP22.31■■□□□ 1.16
SS18-224ENST00000584083 A0A087X0B3 334 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 CLCNKBP51801 687 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 ELAVL2Q12926 359 aaKnown RBP22.31■■□□□ 1.16
SS18-224ENST00000584083 DCLRE1AQ6PJP8 1040 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 SFR1Q86XK3 245 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 GLYCTKQ8IVS8 523 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 ZMAT2Q96NC0 199 aaKnown RBP22.31■■□□□ 1.16
SS18-224ENST00000584083 C1QTNF1Q9BXJ1 281 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 GOLGA2P5Q9HBQ8 144 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 CDH22Q9UJ99 828 aa22.31■■□□□ 1.16
SS18-224ENST00000584083 MTCL1Q9Y4B5 1905 aaKnown RBP22.3■■□□□ 1.16
SS18-224ENST00000584083 PI4K2BG5E9Z4 385 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 CUTAO60888 179 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 GLUD1P00367 558 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 WEE2P0C1S8 567 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 ALADP13716 330 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 KCNE1P15382 129 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 MTHFRP42898 656 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 CREMQ03060 361 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 SLC10A6Q3KNW5 377 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 ZC2HC1CQ53FD0 456 aaPredicted RBP22.3■■□□□ 1.16
SS18-224ENST00000584083 ELMSAN1Q6PJG2 1045 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 PRSS55Q6UWB4 352 aaPredicted RBP22.3■■□□□ 1.16
SS18-224ENST00000584083 TMC5Q6UXY8 1006 aa22.3■■□□□ 1.16
SS18-224ENST00000584083 PALB2Q86YC2 1186 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms