RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 ZMYND10O75800 440 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 C8AP07357 584 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SRFP11831 508 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PEX3P56589 373 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DMP1Q13316 513 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NBR1Q14596 966 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ATF7IP2Q5U623 682 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KRT79Q5XKE5 535 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 EEF1DP3Q658K8 133 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ZNF707Q96C28 371 aaPredicted RBP9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DRC1Q96MC2 740 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 UROC1Q96N76 676 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RTP3Q9BQQ7 232 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PRKD2Q9BZL6 878 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NT5C3AQ9H0P0 336 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 POLIQ9UNA4 740 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KIAA1024Q9UPX6 916 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MYH15Q9Y2K3 1946 aa9.58□□□□□ -0.88
CDK5RAP3-229ENST00000583697 USP34Q70CQ2 3546 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TTLL13PA6NNM8 815 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CCDC169A6NNP5 214 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TMEM189-UBE2V1I3L0A0 370 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 K7ERI5 159 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 XYLBO75191 536 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 B3GAT3O94766 335 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 EDN1P05305 212 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 HNRNPA1P09651 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 FSHRP23945 695 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 HOXA9P31269 272 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 GRASPQ7Z6J2 395 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CCDC105Q8IYK2 499 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RSAD2Q8WXG1 361 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MYADMQ96S97 322 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CCDC94Q9BW85 323 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CA14Q9ULX7 337 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DNM3Q9UQ16 869 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 USP20Q9Y2K6 914 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ZFP37Q9Y6Q3 630 aaPredicted RBP9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NUMBLQ9Y6R0 609 aa9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PDCD11Q14690 1871 aaKnown RBP9.57□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MYO15AQ9UKN7 3530 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 E9PMD0 336 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TRAPPC3O43617 180 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PAPLNO95428 1278 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 HARSP12081 509 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 LAMP2P13473 410 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NBL1P41271 181 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 GRM5P41594 1212 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CLCNKBP51801 687 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PTGDRQ13258 359 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NAB2Q15742 525 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ECM1Q16610 540 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MCTP1Q6DN14 999 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 LILRA6Q6PI73 481 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DTHD1Q6ZMT9 781 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MTSS1LQ765P7 747 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CEP120Q8N960 986 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 IGSF22Q8N9C0 903 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 LNX1Q8TBB1 728 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SLC7A14Q8TBB6 771 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KIF2CQ99661 725 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MRPL4Q9BYD3 311 aaKnown RBP9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CDT1Q9H211 546 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 KMT5AQ9NQR1 393 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ARHGEF3Q9NR81 526 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SLC38A7Q9NVC3 462 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MTRRQ9UBK8 725 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 WNT16Q9UBV4 365 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TNFSF13BQ9Y275 285 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PCDHB6Q9Y5E3 794 aa9.56□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MYH11P35749 1972 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CITO14578 2027 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 MIA3Q5JRA6 1907 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PROB1E7EW31 1015 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CCL16O15467 120 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 HIP1RO75146 1068 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NPR3P17342 541 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 U2AF2P26368 475 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 OR1D2P34982 312 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PRPHP41219 470 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NPTX2P47972 431 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 OSTNP61366 133 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 STRN3Q13033 797 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 HTR4Q13639 388 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PDIA5Q14554 519 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ANGPT1Q15389 498 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ZRSR1Q15695 479 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 RILPL1Q5EBL4 403 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 ANKS3Q6ZW76 656 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 SLC44A3Q8N4M1 653 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DTWD2Q8NBA8 298 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 NKD2Q969F2 451 aaPredicted RBP9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 DDX27Q96GQ7 796 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CDK5RAP3Q96JB5 506 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 CLSTN3Q9BQT9 956 aa9.55□□□□□ -0.88
CDK5RAP3-229ENST00000583697 TCHPQ9BT92 498 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms