RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 DDX3XO00571 662 aaKnown RBP eCLIP24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 CSDE1O75534 798 aaKnown RBP24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 URI1O94763 535 aaPredicted RBP24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 HLA-DRAP01903 254 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 MYL3P08590 195 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 MFAP3P55082 362 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 C10orf76Q5T2E6 689 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 VPS36Q86VN1 386 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 FAM71AQ8IYT1 594 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 PPM1KQ8N3J5 372 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 NLRP7Q8WX94 980 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 CFHR5Q9BXR6 569 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 ADAMTS10Q9H324 1103 aa24.33■■□□□ 1.49
VCPKMT-205ENST00000569518 PURAQ00577 322 aaKnown RBP24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 GCNT1Q02742 428 aa24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 NAB2Q15742 525 aa24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 WDR49Q8IV35 697 aa24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 OR5B17Q8NGF7 314 aa24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 SECISBP2LQ93073 1101 aaKnown RBP24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.33■■□□□ 1.48
VCPKMT-205ENST00000569518 SMIM35A0A1B0GVV1 85 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 MACROD2A1Z1Q3 448 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 CTAGE9A4FU28 777 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 HOXC8P31273 242 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 SRGAP1Q7Z6B7 1085 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 CDR2LQ86X02 465 aaPredicted RBP24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 LNX1Q8TBB1 728 aaPredicted RBP24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 PPP1R13LQ8WUF5 828 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 TATDN2Q93075 761 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 NAPGQ99747 312 aaPredicted RBP24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 PI4K2AQ9BTU6 479 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 KATNAL1Q9BW62 490 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 PDZD7Q9H5P4 517 aa24.32■■□□□ 1.48
VCPKMT-205ENST00000569518 MYADML2A6NDP7 307 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 GPR25O00155 361 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 ARF4P18085 180 aaPredicted RBP24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 AP3M2P53677 418 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 GJA9P57773 515 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 CHMP4BP1P59074 171 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 SP3Q02447 781 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 RUFY4Q6ZNE9 571 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 UPF3AQ9H1J1 476 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 SALL4Q9UJQ4 1053 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 MRFAP1Q9Y605 127 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 TSPAN1O60635 241 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 GPR32O75388 356 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 MCF2P10911 925 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 PIK3CAP42336 1068 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 NKX3-2P78367 333 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 CDC42EP1Q00587 391 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 BIRC3Q13489 604 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 SURF1Q15526 300 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 TMEM132AQ24JP5 1023 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 ALKBH5Q6P6C2 394 aaKnown RBP24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 ENOSF1Q7L5Y1 443 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 CEP120Q8N960 986 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 PACSIN1Q9BY11 444 aa24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 FAM49AQ9H0Q0 323 aaPredicted RBP24.31■■□□□ 1.48
VCPKMT-205ENST00000569518 TRIP12Q14669 1992 aaPredicted RBP24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 THNSL1Q8IYQ7 743 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 ELMO3Q96BJ8 720 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 FAM81BQ96LP2 452 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 SCLT1Q96NL6 688 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 C1orf112Q9NSG2 853 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 CAPN6Q9Y6Q1 641 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 SCN10AQ9Y5Y9 1956 aa24.3■■□□□ 1.48
VCPKMT-205ENST00000569518 KPNA6O60684 536 aa24.29■■□□□ 1.48
VCPKMT-205ENST00000569518 SLU7O95391 586 aaKnown RBP24.29■■□□□ 1.48
VCPKMT-205ENST00000569518 CYP2C9P11712 490 aa24.29■■□□□ 1.48
VCPKMT-205ENST00000569518 TRIM32Q13049 653 aa24.29■■□□□ 1.48
VCPKMT-205ENST00000569518 KIZQ2M2Z5 673 aa24.29■■□□□ 1.48
VCPKMT-205ENST00000569518 GLYCTKQ8IVS8 523 aa24.29■■□□□ 1.48
VCPKMT-205ENST00000569518 BTNL10A8MVZ5 291 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 SEPT4O43236 478 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 B4GALT4O60513 344 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 C6orf222P0C671 652 aaPredicted RBP24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 APLP1P51693 650 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 AMPD2Q01433 879 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 RNF10Q8N5U6 811 aaKnown RBP24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 CPB2Q96IY4 423 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 A0A1B0GUA9 196 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 POU5F1Q01860 360 aaKnown RBP24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 CACNB2Q08289 660 aaPredicted RBP24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 WDR44Q5JSH3 913 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 TMEM192Q8IY95 271 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 TRIM58Q8NG06 486 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 EPS8L1Q8TE68 723 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 AGPAT1Q99943 283 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 RNF186Q9NXI6 227 aa24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 NOCTQ9UK39 431 aaKnown RBP24.28■■□□□ 1.48
VCPKMT-205ENST00000569518 MEFVO15553 781 aaPredicted RBP24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 MOCS3O95396 460 aa24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 EFCAB13Q8IY85 973 aa24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 SLC20A1Q8WUM9 679 aa24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 MTMR12Q9C0I1 747 aa24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 APOBEC3GQ9HC16 384 aaKnown RBP24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 HDAC6Q9UBN7 1215 aa24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 INTUQ9ULD6 942 aa24.27■■□□□ 1.48
VCPKMT-205ENST00000569518 ANO9A1A5B4 782 aa24.26■■□□□ 1.47
VCPKMT-205ENST00000569518 DYNC1I1O14576 645 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms