RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 KIAA1841Q6NSI8 718 aa19.2■□□□□ 0.66
EDC3-215ENST00000569007 PPFIBP1Q86W92 1011 aa19.2■□□□□ 0.66
EDC3-215ENST00000569007 HASPINQ8TF76 798 aa19.2■□□□□ 0.66
EDC3-215ENST00000569007 PPP1R10Q96QC0 940 aaKnown RBP19.2■□□□□ 0.66
EDC3-215ENST00000569007 PANK2Q9BZ23 570 aa19.2■□□□□ 0.66
EDC3-215ENST00000569007 TOPORSQ9NS56 1045 aaPredicted RBP19.2■□□□□ 0.66
EDC3-215ENST00000569007 CHST7Q9NS84 486 aa19.2■□□□□ 0.66
EDC3-215ENST00000569007 SSX2IPQ9Y2D8 614 aa19.2■□□□□ 0.66
EDC3-215ENST00000569007 SMIM28A0A1B0GU29 152 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 K7ENM7 598 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 SPTLC2O15270 562 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 TRAK2O60296 914 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 KIF4AO95239 1232 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 DSG1Q02413 1049 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 NOLC1Q14978 699 aaKnown RBP eCLIP19.19■□□□□ 0.66
EDC3-215ENST00000569007 USP41Q3LFD5 358 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 FOXD4L6Q3SYB3 417 aaPredicted RBP19.19■□□□□ 0.66
EDC3-215ENST00000569007 FOXD4L3Q6VB84 417 aaPredicted RBP19.19■□□□□ 0.66
EDC3-215ENST00000569007 CCDC73Q6ZRK6 1079 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 C12orf76Q8N812 135 aaPredicted RBP19.19■□□□□ 0.66
EDC3-215ENST00000569007 KCNN1Q92952 543 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 BICD1Q96G01 975 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 ACAP3Q96P50 834 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 EPHX3Q9H6B9 360 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 DZANK1Q9NVP4 752 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 CDH22Q9UJ99 828 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 TBX20Q9UMR3 447 aa19.19■□□□□ 0.66
EDC3-215ENST00000569007 SF3B1O75533 1304 aaKnown RBP eCLIP19.19■□□□□ 0.662e-11■■■■■ 62
EDC3-215ENST00000569007 A0A087X0B3 334 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 TEX28O15482 410 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 CLDN3O15551 220 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 F13A1P00488 732 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 STAT6P42226 847 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 CLCN4P51793 760 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 PKP1Q13835 747 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 CBX2Q14781 532 aaPredicted RBP19.18■□□□□ 0.66
EDC3-215ENST00000569007 SEZ6Q53EL9 994 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 XKR4Q5GH76 650 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 ALKAL1Q6UXT8 129 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 DYMQ7RTS9 669 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 SNX27Q96L92 541 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 FIZ1Q96SL8 496 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 PHF7Q9BWX1 381 aaPredicted RBP19.18■□□□□ 0.66
EDC3-215ENST00000569007 RXFP1Q9HBX9 757 aa19.18■□□□□ 0.66
EDC3-215ENST00000569007 MYMKA6NI61 221 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 MEFVO15553 781 aaPredicted RBP19.17■□□□□ 0.66
EDC3-215ENST00000569007 PPP6R2O75170 966 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 YEATS4O95619 227 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 SCP2P22307 547 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 NMT1P30419 496 aaKnown RBP19.17■□□□□ 0.66
EDC3-215ENST00000569007 MATR3P43243 847 aaKnown RBP eCLIP19.17■□□□□ 0.66
EDC3-215ENST00000569007 LIG4P49917 911 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 MCL1Q07820 350 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 RARS2Q5T160 578 aaKnown RBP19.17■□□□□ 0.66
EDC3-215ENST00000569007 CES5AQ6NT32 575 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 KANK3Q6NY19 840 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 SV2BQ7L1I2 683 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 PDILTQ8N807 584 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 RIN2Q8WYP3 895 aaPredicted RBP19.17■□□□□ 0.66
EDC3-215ENST00000569007 DDX12PQ92771 950 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 FBXL18Q96ME1 805 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 ZMAT2Q96NC0 199 aaKnown RBP19.17■□□□□ 0.66
EDC3-215ENST00000569007 HAPLN2Q9GZV7 340 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 ADAM7Q9H2U9 754 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 GOLGA2P5Q9HBQ8 144 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 MYH15Q9Y2K3 1946 aa19.17■□□□□ 0.66
EDC3-215ENST00000569007 TRIP11Q15643 1979 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 HNRNPDLO14979 420 aaKnown RBP19.16■□□□□ 0.66
EDC3-215ENST00000569007 ADH1AP07327 375 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 KCNE1P15382 129 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 IGFBP6P24592 240 aaPredicted RBP19.16■□□□□ 0.66
EDC3-215ENST00000569007 CLCNKBP51801 687 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 ITIH3Q06033 890 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 SOX4Q06945 474 aaPredicted RBP19.16■□□□□ 0.66
EDC3-215ENST00000569007 RTP2Q5QGT7 225 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 FAM171A1Q5VUB5 890 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 RPGRIP1Q96KN7 1286 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 UROC1Q96N76 676 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 CNTN3Q9P232 1028 aa19.16■□□□□ 0.66
EDC3-215ENST00000569007 LOC730098B7Z3J9 87 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 PI4K2BG5E9Z4 385 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 B3GAT3O94766 335 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 PIGRP01833 764 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 WEE2P0C1S8 567 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 GTF2BQ00403 316 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 UPP1Q16831 310 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 SLC10A6Q3KNW5 377 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 ZC2HC1CQ53FD0 456 aaPredicted RBP19.15■□□□□ 0.66
EDC3-215ENST00000569007 DCLRE1AQ6PJP8 1040 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 PRSS55Q6UWB4 352 aaPredicted RBP19.15■□□□□ 0.66
EDC3-215ENST00000569007 SFR1Q86XK3 245 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 GPR65Q8IYL9 337 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 DNAJC19Q96DA6 116 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 TTPALQ9BTX7 342 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 C1QTNF1Q9BXJ1 281 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.15■□□□□ 0.66
EDC3-215ENST00000569007 SLC38A7Q9NVC3 462 aa19.15■□□□□ 0.66
EDC3-215ENST00000569007 SPDYE4A6NLX3 237 aa19.14■□□□□ 0.65
EDC3-215ENST00000569007 TMEM189-UBE2V1I3L0A0 370 aa19.14■□□□□ 0.65
EDC3-215ENST00000569007 CUTAO60888 179 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms