RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 C12orf76Q8N812 135 aaPredicted RBP27.89■■■□□ 2.06
MSLN-203ENST00000561896 UROC1Q96N76 676 aa27.89■■■□□ 2.06
MSLN-203ENST00000561896 CXCL16Q9H2A7 254 aa27.89■■■□□ 2.06
MSLN-203ENST00000561896 BLOC1S4Q9NUP1 217 aa27.89■■■□□ 2.06
MSLN-203ENST00000561896 DENND4AQ7Z401 1863 aa27.89■■■□□ 2.05
MSLN-203ENST00000561896 TOM1L1O75674 476 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 KIF4AO95239 1232 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 GLUD1P00367 558 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 GRIN1Q05586 938 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 SNX21Q969T3 373 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 TCHPQ9BT92 498 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 ZSCAN16Q9H4T2 348 aaPredicted RBP27.88■■■□□ 2.05
MSLN-203ENST00000561896 USTQ9Y2C2 406 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 CLIC4Q9Y696 253 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 MYO10Q9HD67 2058 aa27.88■■■□□ 2.05
MSLN-203ENST00000561896 PAPLNO95428 1278 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 PLCG1P19174 1290 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 ZNF131P52739 623 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 NCKAP1LP55160 1127 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 PDXDC1Q6P996 788 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 GPBP1Q86WP2 473 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 RASSF8Q8NHQ8 419 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 RABGGTAQ92696 567 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 RAD54LQ92698 747 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 PLEKHA4Q9H4M7 779 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 SLC38A7Q9NVC3 462 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 CDH22Q9UJ99 828 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 MTMR6Q9Y217 621 aa27.87■■■□□ 2.05
MSLN-203ENST00000561896 SRPRBQ9Y5M8 271 aaKnown RBP27.87■■■□□ 2.05
MSLN-203ENST00000561896 C2orf16Q68DN1 1984 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 SMIM28A0A1B0GU29 152 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 KARSQ15046 597 aaKnown RBP27.86■■■□□ 2.05
MSLN-203ENST00000561896 DCLRE1AQ6PJP8 1040 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 TMC5Q6UXY8 1006 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 CEP120Q8N960 986 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 LRRC15Q8TF66 581 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 RIN2Q8WYP3 895 aaPredicted RBP27.86■■■□□ 2.05
MSLN-203ENST00000561896 ACAP3Q96P50 834 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 REEP2Q9BRK0 252 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 TTPALQ9BTX7 342 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 MAN1C1Q9NR34 630 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 CACNG4Q9UBN1 327 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 HCN4Q9Y3Q4 1203 aa27.86■■■□□ 2.05
MSLN-203ENST00000561896 VWA8A3KMH1 1905 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 NPHP3-ACAD11A0A0J9YXS1 232 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 SPDYE4A6NLX3 237 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 KCNE1P15382 129 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 ABCD1P33897 745 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 DDIT3P35638 169 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 PIK3R5Q8WYR1 880 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 LARP4BQ92615 738 aaKnown RBP27.85■■■□□ 2.05
MSLN-203ENST00000561896 DDX27Q96GQ7 796 aaKnown RBP27.85■■■□□ 2.05
MSLN-203ENST00000561896 B3GALT6Q96L58 329 aa27.85■■■□□ 2.05
MSLN-203ENST00000561896 FBXO2Q9UK22 296 aaPredicted RBP27.85■■■□□ 2.05
MSLN-203ENST00000561896 STX6O43752 255 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 ZXDAP98168 799 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 NOLC1Q14978 699 aaKnown RBP eCLIP27.84■■■□□ 2.05
MSLN-203ENST00000561896 UPP1Q16831 310 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 GLRA4Q5JXX5 417 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 RTP2Q5QGT7 225 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 FAM171A1Q5VUB5 890 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 KANK3Q6NY19 840 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 LILRA6Q6PI73 481 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 HAUS6Q7Z4H7 955 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 ZBTB33Q86T24 672 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 PLCD3Q8N3E9 789 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 SNX27Q96L92 541 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 PARVGQ9HBI0 331 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 CNTN3Q9P232 1028 aa27.84■■■□□ 2.05
MSLN-203ENST00000561896 PDCD11Q14690 1871 aaKnown RBP27.84■■■□□ 2.05
MSLN-203ENST00000561896 WEE2P0C1S8 567 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 PDIA4P13667 645 aaKnown RBP27.83■■■□□ 2.05
MSLN-203ENST00000561896 CACNB1Q02641 598 aaPredicted RBP27.83■■■□□ 2.05
MSLN-203ENST00000561896 MCL1Q07820 350 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 MCM6Q14566 821 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 PTPN21Q16825 1174 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.83■■■□□ 2.05
MSLN-203ENST00000561896 ZDHHC14Q8IZN3 488 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 HASPINQ8TF76 798 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 STK17AQ9UEE5 414 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 CCDC39Q9UFE4 941 aa27.83■■■□□ 2.05
MSLN-203ENST00000561896 C2CD4DB7Z1M9 353 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 CLDN3O15551 220 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 TGM5O43548 720 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 TRAPPC3O43617 180 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 B3GAT3O94766 335 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 FAM13AO94988 1023 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 MARCKSP29966 332 aaPredicted RBP27.82■■■□□ 2.04
MSLN-203ENST00000561896 CLCNKBP51801 687 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 OSTNP61366 133 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 TRIM67Q6ZTA4 783 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 BMP8AQ7Z5Y6 402 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 LNX1Q8TBB1 728 aaPredicted RBP27.82■■■□□ 2.04
MSLN-203ENST00000561896 EPSTI1Q96J88 318 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 ZBTB45Q96K62 511 aaPredicted RBP27.82■■■□□ 2.04
MSLN-203ENST00000561896 TSHZ2Q9NRE2 1034 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 ANKFY1Q9P2R3 1169 aa27.82■■■□□ 2.04
MSLN-203ENST00000561896 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.82■■■□□ 2.04
MSLN-203ENST00000561896 ZNF318Q5VUA4 2279 aa27.81■■■□□ 2.04
MSLN-203ENST00000561896 PIGRP01833 764 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms