RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 KIAA1586Q9HCI6 787 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 PNPOQ9NVS9 261 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 CROTQ9UKG9 612 aa6.2□□□□□ -1.42
SCFD1-209ENST00000553280 ISM1B1AKI9 464 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 MALP21145 153 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 POLD1P28340 1107 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 BUD31P41223 144 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-209ENST00000553280 HALP42357 657 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 SESN2P58004 480 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-209ENST00000553280 TLE1Q04724 770 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 ZNF543Q08ER8 600 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 SNAPC2Q13487 334 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 NFIXQ14938 502 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 IZUMO3Q5VZ72 239 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 TRIM68Q6AZZ1 485 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 MYLK4Q86YV6 388 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-209ENST00000553280 SP8Q8IXZ3 490 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 ANKRD42Q8N9B4 389 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 OR7D4Q8NG98 312 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 IFI44Q8TCB0 444 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 FNIP1Q8TF40 1166 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 POF1BQ8WVV4 589 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 NOX5Q96PH1 765 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 UIMC1Q96RL1 719 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 VRK1Q99986 396 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-209ENST00000553280 PDCD2LQ9BRP1 358 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 WDR12Q9GZL7 423 aaKnown RBP6.19□□□□□ -1.42
SCFD1-209ENST00000553280 ADAM7Q9H2U9 754 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 C14orf93Q9H972 538 aaKnown RBP6.19□□□□□ -1.42
SCFD1-209ENST00000553280 ARFGAP3Q9NP61 516 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 STARD7Q9NQZ5 370 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 ABCF2Q9UG63 623 aa6.19□□□□□ -1.42
SCFD1-209ENST00000553280 A0A1W2PPL8 197 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 MYO1FO00160 1098 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 KPNA5O15131 536 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 FOXD2O60548 495 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-209ENST00000553280 PPFIA4O75335 1185 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 GASTP01350 101 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 AMY1AP04745 511 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 TNFSF4P23510 183 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 SREBF1P36956 1147 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 STAT5BP51692 787 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 PER3P56645 1201 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 WNT3AP56704 352 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 FMO1Q01740 532 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 TOP3AQ13472 1001 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-209ENST00000553280 VWA3BQ502W6 1294 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 CLEC14AQ86T13 490 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 SAPCD2Q86UD0 394 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 PQLC1Q8N2U9 271 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 CCHCR1Q8TD31 782 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 ZNF480Q8WV37 535 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 RAB24Q969Q5 203 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 ZC3H10Q96K80 434 aaKnown RBP6.18□□□□□ -1.42
SCFD1-209ENST00000553280 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-209ENST00000553280 STAP2Q9UGK3 403 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 TRPS1Q9UHF7 1281 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 PADI4Q9UM07 663 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 LRCH1Q9Y2L9 728 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 USP19O94966 1318 aa6.18□□□□□ -1.42
SCFD1-209ENST00000553280 MYBBP1AQ9BQG0 1328 aaKnown RBP6.18□□□□□ -1.42
SCFD1-209ENST00000553280 TBX3O15119 743 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 PIP5K1CO60331 668 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 FTH1P19P0C7X4 201 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 SMARCA1P28370 1054 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 CRHR1P34998 444 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 ETV4P43268 484 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 KCNC1P48547 511 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 KCNQ1P51787 676 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 SLURP1P55000 103 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 MLLT6P55198 1093 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-209ENST00000553280 ATP8B2P98198 1209 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 FAM209BQ5JX69 171 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 GADL1Q6ZQY3 521 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 SH2D3CQ8N5H7 860 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 MSL3Q8N5Y2 521 aaKnown RBP6.17□□□□□ -1.42
SCFD1-209ENST00000553280 BRI3BPQ8WY22 251 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 TMX3Q96JJ7 454 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 UNKQ9C0B0 810 aaKnown RBP6.17□□□□□ -1.42
SCFD1-209ENST00000553280 WDCPQ9H6R7 721 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 ZNF287Q9HBT7 754 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 TLR9Q9NR96 1032 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 CORO2BQ9UQ03 480 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 SNX13Q9Y5W8 968 aa6.17□□□□□ -1.42
SCFD1-209ENST00000553280 DDX3XO00571 662 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 EIF5BO60841 1220 aaKnown RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 NBNO60934 754 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 ALDH1A2O94788 518 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 KLHL18O94889 574 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 DDCP20711 480 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 IL13P35225 146 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 STT3AP46977 705 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 CNGA2Q16280 664 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
SCFD1-209ENST00000553280 TRMT10BQ6PF06 316 aaKnown RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 TMED8Q6PL24 325 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 SMAP1Q8IYB5 467 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 ZGPATQ8N5A5 531 aaKnown RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 LILRA3Q8N6C8 439 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-209ENST00000553280 PLA2G15Q8NCC3 412 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms