RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 NCKAP1LP55160 1127 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 ITIH3Q06033 890 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 MCM6Q14566 821 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 ZNF568Q3ZCX4 644 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 PRSS55Q6UWB4 352 aaPredicted RBP14.31□□□□□ -0.12
NPAS3-209ENST00000551008 TMC5Q6UXY8 1006 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 MRPL4Q9BYD3 311 aaKnown RBP14.31□□□□□ -0.12
NPAS3-209ENST00000551008 GOLGA2P5Q9HBQ8 144 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 STK39Q9UEW8 545 aa14.31□□□□□ -0.12
NPAS3-209ENST00000551008 PRR33A8MZF0 331 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 ADAM12O43184 909 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 BMP15O95972 392 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 KLRC2P26717 231 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 ZNF131P52739 623 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 BMS1Q14692 1282 aaKnown RBP14.3□□□□□ -0.12
NPAS3-209ENST00000551008 LILRA6Q6PI73 481 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 GPR149Q86SP6 731 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 ZBTB33Q86T24 672 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 GPR65Q8IYL9 337 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 RAD54LQ92698 747 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 EPSTI1Q96J88 318 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 SNX27Q96L92 541 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 EMILIN2Q9BXX0 1053 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 CCSER1Q9C0I3 900 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 MAN1C1Q9NR34 630 aa14.3□□□□□ -0.12
NPAS3-209ENST00000551008 RBM19Q9Y4C8 960 aaKnown RBP14.3□□□□□ -0.12
NPAS3-209ENST00000551008 TSC2P49815 1807 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 SMIM28A0A1B0GU29 152 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 TMEM189-UBE2V1I3L0A0 370 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 FAM189A1O60320 539 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 RFPL2O75678 378 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 MYBP10242 640 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 MCF2P10911 925 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 PDCP20941 246 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
NPAS3-209ENST00000551008 UBA7P41226 1012 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 OSTNP61366 133 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 USP41Q3LFD5 358 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 SEZ6Q53EL9 994 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 HFE2Q6ZVN8 426 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 RIN2Q8WYP3 895 aaPredicted RBP14.29□□□□□ -0.12
NPAS3-209ENST00000551008 EDAQ92838 391 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 ZNF707Q96C28 371 aaPredicted RBP14.29□□□□□ -0.12
NPAS3-209ENST00000551008 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 CLIC6Q96NY7 704 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 SMOC2Q9H3U7 446 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 SFXN1Q9H9B4 322 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 KCND2Q9NZV8 630 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
NPAS3-209ENST00000551008 SF3B1O75533 1304 aaKnown RBP eCLIP14.29□□□□□ -0.12
NPAS3-209ENST00000551008 A0A087X0B3 334 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 N4BP1O75113 896 aaKnown RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 TADA2AO75478 443 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 ADH1AP07327 375 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SPATA31D3P0C874 917 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SCN1AP35498 2009 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 MTHFRP42898 656 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 CLCNKBP51801 687 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 ZXDAP98168 799 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 UPP1Q16831 310 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SLC10A6Q3KNW5 377 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 CES5AQ6NT32 575 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SLC39A4Q6P5W5 647 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 RSPO2Q6UXX9 243 aaPredicted RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SPATA31D4Q6ZUB0 917 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 GLYCTKQ8IVS8 523 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 CMASQ8NFW8 434 aaPredicted RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 LNX1Q8TBB1 728 aaPredicted RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 PIK3R5Q8WYR1 880 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SNX21Q969T3 373 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 NECTIN4Q96NY8 510 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 CLSTN3Q9BQT9 956 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 CNTN3Q9P232 1028 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 ODF2LQ9ULJ1 636 aa14.28□□□□□ -0.12
NPAS3-209ENST00000551008 SRPRBQ9Y5M8 271 aaKnown RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 MORC2Q9Y6X9 1032 aaPredicted RBP14.28□□□□□ -0.12
NPAS3-209ENST00000551008 I3L4J1 428 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 TGM5O43548 720 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 NR1I2O75469 434 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 TOM1L1O75674 476 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 GLUD1P00367 558 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 HARSP12081 509 aaKnown RBP14.27□□□□□ -0.13
NPAS3-209ENST00000551008 KCNE1P15382 129 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 FGFR3P22607 806 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 BRCC3P46736 316 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 MCL1Q07820 350 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 PTPN21Q16825 1174 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 ZBTB41Q5SVQ8 909 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 FAM171A1Q5VUB5 890 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 ZPBP2Q6X784 338 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 HAUS6Q7Z4H7 955 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 PALB2Q86YC2 1186 aa14.27□□□□□ -0.13
NPAS3-209ENST00000551008 LARP4BQ92615 738 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms