RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ACSF2Q96CM8 615 aaPredicted RBP8.48□□□□□ -1.05
NEK3-201ENST00000550331 KLHL5Q96PQ7 755 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 HSD17B14Q9BPX1 270 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 HERC2P3Q9BVR0 1158 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 NFKBIZQ9BYH8 718 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 RHOBTB2Q9BYZ6 727 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 BRMS1Q9HCU9 246 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 GJB4Q9NTQ9 266 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 DPP7Q9UHL4 492 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 PCDHA12Q9UN75 941 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 FAN1Q9Y2M0 1017 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 IPPQ9Y573 584 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 ZMYM2Q9UBW7 1377 aa8.48□□□□□ -1.05
NEK3-201ENST00000550331 ARL5CA6NH57 179 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 NEMFO60524 1076 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 EFEMP2O95967 443 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 C1RP00736 705 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 URODP06132 367 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 ADH1AP07327 375 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 WEE2P0C1S8 567 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 ITGA4P13612 1032 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 FDPSP14324 419 aaKnown RBP8.47□□□□□ -1.05
NEK3-201ENST00000550331 FECHP22830 423 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 KLRC2P26717 231 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 ARL2P36404 184 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 DSC1Q08554 894 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 PTGDRQ13258 359 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 NR5A1Q13285 461 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 CYP26C1Q6V0L0 522 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 CCDC149Q6ZUS6 474 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 OTOP3Q7RTS5 596 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 COLGALT2Q8IYK4 626 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 HACE1Q8IYU2 909 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 KCNG4Q8TDN1 519 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 RMDN1Q96DB5 314 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 RPS6KC1Q96S38 1066 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 EIF2AK1Q9BQI3 630 aaKnown RBP8.47□□□□□ -1.05
NEK3-201ENST00000550331 CSRNP2Q9H175 543 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 XPNPEP1Q9NQW7 623 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 MARCH5Q9NX47 278 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 DENND4AQ7Z401 1863 aa8.47□□□□□ -1.05
NEK3-201ENST00000550331 INO80B-WBP1J3KQ70 363 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 ZBTB39O15060 712 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 TEX28O15482 410 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 KRT37O76014 449 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 PAPLNO95428 1278 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 GLUD1P00367 558 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 SSBP05455 408 aaKnown RBP eCLIP8.46□□□□□ -1.06
NEK3-201ENST00000550331 XRCC6P12956 609 aaKnown RBP eCLIP8.46□□□□□ -1.06
NEK3-201ENST00000550331 MLH1P40692 756 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 GLUD2P49448 558 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 RARRES1P49788 294 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 MMP16P51512 607 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 AK2P54819 239 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 CAPSQ13938 189 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 ANGPT1Q15389 498 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 CALCRLQ16602 461 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 CCDC105Q8IYK2 499 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 GPR65Q8IYL9 337 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 GTF3C6Q969F1 213 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 CCDC43Q96MW1 224 aaKnown RBP8.46□□□□□ -1.06
NEK3-201ENST00000550331 MTMR9Q96QG7 549 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 GAD1Q99259 594 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 EIF2AQ9BY44 585 aaKnown RBP8.46□□□□□ -1.06
NEK3-201ENST00000550331 TRIM6Q9C030 488 aaPredicted RBP8.46□□□□□ -1.06
NEK3-201ENST00000550331 TTC12Q9H892 705 aaPredicted RBP8.46□□□□□ -1.06
NEK3-201ENST00000550331 RXFP1Q9HBX9 757 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 MAN1C1Q9NR34 630 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 GIT1Q9Y2X7 761 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 PRG3Q9Y2Y8 225 aaPredicted RBP8.46□□□□□ -1.06
NEK3-201ENST00000550331 FANCMQ8IYD8 2048 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 SPTBN2O15020 2390 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 CACNA1GO43497 2377 aa8.46□□□□□ -1.06
NEK3-201ENST00000550331 KMT2BQ9UMN6 2715 aaPredicted RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 ACACBO00763 2458 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 OTOGLQ3ZCN5 2332 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 MYH9P35579 1960 aaKnown RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 A0A1B0GUA9 196 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 C2CD2LO14523 706 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 EIF5BO60841 1220 aaKnown RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 ARF4P18085 180 aaPredicted RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 AOC1P19801 751 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 GLRA2P23416 452 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 OR1G1P47890 313 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 SCNN1GP51170 649 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 SKOR1P84550 965 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 DSG1Q02413 1049 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 CREMQ03060 361 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 GRIK3Q13003 919 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 TDGQ13569 410 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 TRIM29Q14134 588 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 AMHR2Q16671 573 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 ME3Q16798 604 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 KIAA0319Q5VV43 1072 aa8.45□□□□□ -1.06
NEK3-201ENST00000550331 CWF19L1Q69YN2 538 aaKnown RBP8.45□□□□□ -1.06
NEK3-201ENST00000550331 SLC27A1Q6PCB7 646 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms