RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 PAAF1Q9BRP4 392 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 TCHPQ9BT92 498 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 ADAM7Q9H2U9 754 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 PARVGQ9HBI0 331 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 RXFP1Q9HBX9 757 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 TOPORSQ9NS56 1045 aaPredicted RBP18.55■□□□□ 0.56
HOXD8-204ENST00000544999 CACNG4Q9UBN1 327 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 STK17AQ9UEE5 414 aa18.55■□□□□ 0.56
HOXD8-204ENST00000544999 MUC3AQ02505 3323 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 SF3B1O75533 1304 aaKnown RBP eCLIP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 KRT18P05783 430 aaKnown RBP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 ADH1AP07327 375 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 HSP90AA1P07900 732 aaKnown RBP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 ALADP13716 330 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 NOLC1Q14978 699 aaKnown RBP eCLIP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 ALKAL1Q6UXT8 129 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 HAUS6Q7Z4H7 955 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 MYCT1Q8N699 235 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 KRI1Q8N9T8 703 aaKnown RBP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 ZBTB45Q96K62 511 aaPredicted RBP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 NECTIN4Q96NY8 510 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 ACAP3Q96P50 834 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.54■□□□□ 0.56
HOXD8-204ENST00000544999 CITO14578 2027 aa18.54■□□□□ 0.56
HOXD8-204ENST00000544999 TMEM189-UBE2V1I3L0A0 370 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 TEX28O15482 410 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 DCXO43602 365 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 TBCAO75347 108 aaKnown RBP18.53■□□□□ 0.56
HOXD8-204ENST00000544999 KIF4AO95239 1232 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 MTHFRP42898 656 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 OSTNP61366 133 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 ELAVL2Q12926 359 aaKnown RBP18.53■□□□□ 0.56
HOXD8-204ENST00000544999 STK38Q15208 465 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 GLRA4Q5JXX5 417 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 RARS2Q5T160 578 aaKnown RBP18.53■□□□□ 0.56
HOXD8-204ENST00000544999 RRAGBQ5VZM2 374 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 LINC00301Q8NCQ3 95 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 SNX27Q96L92 541 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 FBXL18Q96ME1 805 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 UROC1Q96N76 676 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 ZNF396Q96N95 335 aaPredicted RBP18.53■□□□□ 0.56
HOXD8-204ENST00000544999 SFXN1Q9H9B4 322 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 FNIP2Q9P278 1114 aa18.53■□□□□ 0.56
HOXD8-204ENST00000544999 SMIM28A0A1B0GU29 152 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 K7ENM7 598 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 TRAK2O60296 914 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 C1RP00736 705 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 HARSP12081 509 aaKnown RBP18.52■□□□□ 0.56
HOXD8-204ENST00000544999 ABCD1P33897 745 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 CREMQ03060 361 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 MCL1Q07820 350 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 RNF135Q8IUD6 432 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 C12orf76Q8N812 135 aaPredicted RBP18.52■□□□□ 0.56
HOXD8-204ENST00000544999 HASPINQ8TF76 798 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 BICD1Q96G01 975 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 RPGRIP1Q96KN7 1286 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 RIPOR3Q96MK2 946 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 ZHX3Q9H4I2 956 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 SLC38A7Q9NVC3 462 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 ANKFY1Q9P2R3 1169 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 TBX20Q9UMR3 447 aa18.52■□□□□ 0.56
HOXD8-204ENST00000544999 PLXNA3P51805 1871 aa18.52■□□□□ 0.55
HOXD8-204ENST00000544999 CLDN3O15551 220 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 GPR37L1O60883 481 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 GLUD1P00367 558 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 PIGRP01833 764 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 KCNE1P15382 129 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 RIN2Q8WYP3 895 aaPredicted RBP18.51■□□□□ 0.55
HOXD8-204ENST00000544999 B3GALT6Q96L58 329 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 FIZ1Q96SL8 496 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 TTPALQ9BTX7 342 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 CNTN3Q9P232 1028 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 DPP7Q9UHL4 492 aa18.51■□□□□ 0.55
HOXD8-204ENST00000544999 SPDYE4A6NLX3 237 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 SPTLC2O15270 562 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 PPP6R2O75170 966 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 YEATS4O95619 227 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
HOXD8-204ENST00000544999 MATR3P43243 847 aaKnown RBP eCLIP18.5■□□□□ 0.55
HOXD8-204ENST00000544999 LIG4P49917 911 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 CLCNKBP51801 687 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 UPP1Q16831 310 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 HERC4Q5GLZ8 1057 aaPredicted RBP18.5■□□□□ 0.55
HOXD8-204ENST00000544999 TMEM31Q5JXX7 168 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 RTP2Q5QGT7 225 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 ATAT1Q5SQI0 421 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 FAM171A1Q5VUB5 890 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 ELMSAN1Q6PJG2 1045 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 DCLRE1AQ6PJP8 1040 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 SV2BQ7L1I2 683 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 DDX27Q96GQ7 796 aaKnown RBP18.5■□□□□ 0.55
HOXD8-204ENST00000544999 POMKQ9H5K3 350 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 MAN1C1Q9NR34 630 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 CDH22Q9UJ99 828 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 NR2E1Q9Y466 385 aa18.5■□□□□ 0.55
HOXD8-204ENST00000544999 PDCD11Q14690 1871 aaKnown RBP18.5■□□□□ 0.55
HOXD8-204ENST00000544999 MTCL1Q9Y4B5 1905 aaKnown RBP18.49■□□□□ 0.55
HOXD8-204ENST00000544999 B3GAT3O94766 335 aa18.49■□□□□ 0.55
HOXD8-204ENST00000544999 F13A1P00488 732 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms