RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 CLSTN3Q9BQT9 956 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 TTPALQ9BTX7 342 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 C2orf40Q9H1Z8 148 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 CXCL16Q9H2A7 254 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 FBXW11Q9UKB1 542 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 USP20Q9Y2K6 914 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 NUMBLQ9Y6R0 609 aa17.1■□□□□ 0.33
CSF1R-209ENST00000543093 PTPRZ1P23471 2315 aaPredicted RBP17.1■□□□□ 0.33
CSF1R-209ENST00000543093 MYH11P35749 1972 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 FAM186AA6NE01 2351 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 CFAP54Q96N23 3096 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 PRKCBP05771 671 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 THP07101 528 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 U2AF2P26368 475 aaKnown RBP eCLIP17.09■□□□□ 0.33
CSF1R-209ENST00000543093 GJB2P29033 226 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 ZNF174Q15697 407 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 MAPK6Q16659 721 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 LIN9Q5TKA1 542 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 PADI6Q6TGC4 694 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 LNX1Q8TBB1 728 aaPredicted RBP17.09■□□□□ 0.33
CSF1R-209ENST00000543093 PIK3R5Q8WYR1 880 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 POLR3CQ9BUI4 534 aaPredicted RBP17.09■□□□□ 0.33
CSF1R-209ENST00000543093 ARHGEF3Q9NR81 526 aa17.09■□□□□ 0.33
CSF1R-209ENST00000543093 RIF1Q5UIP0 2472 aaKnown RBP17.09■□□□□ 0.33
CSF1R-209ENST00000543093 TRIP11Q15643 1979 aa17.08■□□□□ 0.33
CSF1R-209ENST00000543093 ARHGEF35A5YM69 484 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 EDN1P05305 212 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 C8AP07357 584 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 CYP11B2P19099 503 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 NTHL1P78549 312 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 NAB2Q15742 525 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 SPECC1Q5M775 1068 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 PPM1LQ5SGD2 360 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 EEF1DP3Q658K8 133 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 DEPTORQ8TB45 409 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 ADPGKQ9BRR6 497 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 CCDC113Q9H0I3 377 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 GDAQ9Y2T3 454 aa17.08■□□□□ 0.32
CSF1R-209ENST00000543093 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.08■□□□□ 0.32
CSF1R-209ENST00000543093 ZFP37Q9Y6Q3 630 aaPredicted RBP17.08■□□□□ 0.32
CSF1R-209ENST00000543093 H3BQV1 296 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 ACKR2O00590 384 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 CCL16O15467 120 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 ADAM12O43184 909 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 DCNP07585 359 aaKnown RBP17.07■□□□□ 0.32
CSF1R-209ENST00000543093 HNRNPA1P09651 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
CSF1R-209ENST00000543093 NAMPTP43490 491 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
CSF1R-209ENST00000543093 HAUS3Q68CZ6 603 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 DCLRE1AQ6PJP8 1040 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 RPP25Q9BUL9 199 aaKnown RBP17.07■□□□□ 0.32
CSF1R-209ENST00000543093 SLC2A4RGQ9NR83 387 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 CDH7Q9ULB5 785 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 POLIQ9UNA4 740 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 SPTBN4Q9H254 2564 aa17.07■□□□□ 0.32
CSF1R-209ENST00000543093 RPA1P27694 616 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 NBR1Q14596 966 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 PPP2R5AQ15172 486 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 PDXDC1Q6P996 788 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 PARM1Q6UWI2 310 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 KCNG4Q8TDN1 519 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 FGF14Q92915 247 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 KIFC3Q9BVG8 833 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 POLD4Q9HCU8 107 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 R4GN57 208 aa17.06■□□□□ 0.32
CSF1R-209ENST00000543093 COL4A3Q01955 1670 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 HOXA9P31269 272 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 OR1D2P34982 312 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
CSF1R-209ENST00000543093 GPC5P78333 572 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 DCAF4L1Q3SXM0 396 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
CSF1R-209ENST00000543093 SLC7A14Q8TBB6 771 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 FOXQ1Q9C009 403 aa17.05■□□□□ 0.32
CSF1R-209ENST00000543093 NOTCH4Q99466 2003 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 LAD1O00515 517 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 XYLBO75191 536 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 FGFR3P22607 806 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 IGFBP6P24592 240 aaPredicted RBP17.04■□□□□ 0.32
CSF1R-209ENST00000543093 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
CSF1R-209ENST00000543093 FOXK2Q01167 660 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 RAB33AQ14088 237 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 AXDND1Q5T1B0 1012 aaPredicted RBP17.04■□□□□ 0.32
CSF1R-209ENST00000543093 PJA1Q8NG27 643 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 ITFG1Q8TB96 612 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 FGF13Q92913 245 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 IFT74Q96LB3 600 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 DLGAP2Q9P1A6 1054 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
CSF1R-209ENST00000543093 DMDP11532 3685 aa17.03■□□□□ 0.32
CSF1R-209ENST00000543093 TMEM189-UBE2V1I3L0A0 370 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms