RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 ZP2Q05996 745 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 NOLC1Q14978 699 aaKnown RBP eCLIP17.15■□□□□ 0.34
CIT-210ENST00000539413 XKR4Q5GH76 650 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 KIAA0319Q5VV43 1072 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 SV2BQ7L1I2 683 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 GJD3Q8N144 294 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 PDILTQ8N807 584 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 HASPINQ8TF76 798 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 SLC22A17Q8WUG5 538 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 DDX12PQ92771 950 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 BICD1Q96G01 975 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 ACAP3Q96P50 834 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 PPP1R10Q96QC0 940 aaKnown RBP17.15■□□□□ 0.34
CIT-210ENST00000539413 EMILIN2Q9BXX0 1053 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 S1PR5Q9H228 398 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 TOPORSQ9NS56 1045 aaPredicted RBP17.15■□□□□ 0.34
CIT-210ENST00000539413 PRKAG3Q9UGI9 489 aa17.15■□□□□ 0.34
CIT-210ENST00000539413 SMIM28A0A1B0GU29 152 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 CLDN3O15551 220 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 MEFVO15553 781 aaPredicted RBP17.14■□□□□ 0.33
CIT-210ENST00000539413 SSTR3P32745 418 aaPredicted RBP17.14■□□□□ 0.33
CIT-210ENST00000539413 DSG1Q02413 1049 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 MCL1Q07820 350 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 SHC4Q6S5L8 630 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 ALKAL1Q6UXT8 129 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 SFR1Q86XK3 245 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 ADHFE1Q8IWW8 467 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 KHSRPQ92945 711 aaKnown RBP eCLIP17.14■□□□□ 0.33
CIT-210ENST00000539413 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 SNX27Q96L92 541 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 GOLGA2P5Q9HBQ8 144 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
CIT-210ENST00000539413 BRWD1Q9NSI6 2320 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 CUTAO60888 179 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 PIGRP01833 764 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 HOXB8P17481 243 aaPredicted RBP17.13■□□□□ 0.33
CIT-210ENST00000539413 SCP2P22307 547 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
CIT-210ENST00000539413 KLRC2P26717 231 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 MATR3P43243 847 aaKnown RBP eCLIP17.13■□□□□ 0.332e-8■■■■■ 28.8
CIT-210ENST00000539413 LIG4P49917 911 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 CLCNKBP51801 687 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 GTF2BQ00403 316 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 DNM1Q05193 864 aaKnown RBP17.13■□□□□ 0.33
CIT-210ENST00000539413 ZC2HC1CQ53FD0 456 aaPredicted RBP17.13■□□□□ 0.33
CIT-210ENST00000539413 KIAA1841Q6NSI8 718 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 SUSD6Q92537 303 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 ZMAT2Q96NC0 199 aaKnown RBP17.13■□□□□ 0.33
CIT-210ENST00000539413 CDH22Q9UJ99 828 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 SSX2IPQ9Y2D8 614 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 MUC3AQ02505 3323 aa17.13■□□□□ 0.33
CIT-210ENST00000539413 C19orf67A6NJJ6 358 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
CIT-210ENST00000539413 TEX28O15482 410 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 KCNE1P15382 129 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 CLCN4P51793 760 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 SOX4Q06945 474 aaPredicted RBP17.12■□□□□ 0.33
CIT-210ENST00000539413 SLC10A6Q3KNW5 377 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 USP41Q3LFD5 358 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 RTP2Q5QGT7 225 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
CIT-210ENST00000539413 KANK3Q6NY19 840 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 SLC39A4Q6P5W5 647 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 PPFIBP1Q86W92 1011 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 MAP4K3Q8IVH8 894 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 C12orf76Q8N812 135 aaPredicted RBP17.12■□□□□ 0.33
CIT-210ENST00000539413 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 STAMQ92783 540 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 RXFP1Q9HBX9 757 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 CNTN3Q9P232 1028 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
CIT-210ENST00000539413 SF3B1O75533 1304 aaKnown RBP eCLIP17.12■□□□□ 0.33
CIT-210ENST00000539413 TNFSF9P41273 254 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 E2F4Q16254 413 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 UPP1Q16831 310 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 TPRNQ4KMQ1 711 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 ZNF720Q7Z2F6 126 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 C3orf58Q8NDZ4 430 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
CIT-210ENST00000539413 UROC1Q96N76 676 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 ST6GALNAC4Q9H4F1 302 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 DZANK1Q9NVP4 752 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 TBC1D7Q9P0N9 293 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 CFAP45Q9UL16 551 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 PCDHA7Q9UN72 937 aa17.11■□□□□ 0.33
CIT-210ENST00000539413 TISP43B9A030 160 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 ANKRD63C9JTQ0 380 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 FAM189A1O60320 539 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 B3GAT3O94766 335 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 ADH1AP07327 375 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 CXCL8P10145 99 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 IDEP14735 1019 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 GAP43P17677 238 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 ABCD1P33897 745 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 ME1P48163 572 aa17.1■□□□□ 0.33
CIT-210ENST00000539413 CBX2Q14781 532 aaPredicted RBP17.1■□□□□ 0.33
CIT-210ENST00000539413 ZBTB41Q5SVQ8 909 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms