RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 CNTNAP2Q9UHC6 1331 aa22.68■■□□□ 1.22
PDXDC1-205ENST00000535621 KRT86O43790 486 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 EVI5O60447 810 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 CSDE1O75534 798 aaKnown RBP22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 TNNI1P19237 187 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 CASQ1P31415 396 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 GRK4P32298 578 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 ZNF569Q5MCW4 686 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 NFRKBQ6P4R8 1299 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 MPZL3Q6UWV2 235 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 RUFY4Q6ZNE9 571 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 DNAJC5GQ8N7S2 189 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 FAM84AQ96KN4 292 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 HDAC6Q9UBN7 1215 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 DDX20Q9UHI6 824 aaKnown RBP22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 PTPRJQ12913 1337 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 A0A087X0T9 212 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 OGTO15294 1046 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 FAM228BP0C875 321 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 TNFSF9P41273 254 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 TMEM62Q0P6H9 643 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 KIF5AQ12840 1032 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 ARHGAP44Q17R89 818 aa22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 LMBRD2Q68DH5 695 aaPredicted RBP22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 FAM49AQ9H0Q0 323 aaPredicted RBP22.67■■□□□ 1.22
PDXDC1-205ENST00000535621 AMHR2Q16671 573 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 ZACNQ401N2 412 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 FMNL3Q8IVF7 1028 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 BRSK2Q8IWQ3 736 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 TSGA10Q9BZW7 698 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 L2HGDHQ9H9P8 463 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 TNFSF13BQ9Y275 285 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 DUSP10Q9Y6W6 482 aa22.66■■□□□ 1.22
PDXDC1-205ENST00000535621 MBLAC1A4D2B0 266 aaPredicted RBP22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 FOXN3O00409 490 aaPredicted RBP22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 TREHO43280 583 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 C4BPAP04003 597 aaKnown RBP22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 MAGEA1P43355 309 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 KCNA10Q16322 511 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 SLAIN1Q8ND83 568 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 NLRP7Q8WX94 980 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 VTI1AQ96AJ9 217 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 ZEB2O60315 1214 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 ASGR1P07306 291 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 ANXA13P27216 316 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 ZNF568Q3ZCX4 644 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 TDRD10Q5VZ19 366 aaKnown RBP22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 EEF1DP3Q658K8 133 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 SLC35F6Q8N357 371 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 KLHDC9Q8NEP7 349 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 CGRRF1Q99675 332 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 SPC25Q9HBM1 224 aa22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.65■■□□□ 1.222e-8■■■■■ 148.5
PDXDC1-205ENST00000535621 CPSF3Q9UKF6 684 aaKnown RBP22.65■■□□□ 1.22
PDXDC1-205ENST00000535621 PJA2O43164 708 aa22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 ADAM17P78536 824 aa22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 CCSAPQ6IQ19 270 aaPredicted RBP22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 ZNF410Q86VK4 478 aa22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 PPM1KQ8N3J5 372 aa22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 HELQQ8TDG4 1101 aa22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 KAT5Q92993 513 aa22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 MTG1Q9BT17 334 aaPredicted RBP22.64■■□□□ 1.22
PDXDC1-205ENST00000535621 UQCRHLA0A096LP55 91 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 UQCRHP07919 91 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 CCDC172P0C7W6 258 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 TMEM132AQ24JP5 1023 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 NBPF20Q3BBV1 942 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 CDR2LQ86X02 465 aaPredicted RBP22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 KREMEN1Q96MU8 473 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 NT5C1BQ96P26 610 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 CDT1Q9H211 546 aa22.64■■□□□ 1.21
PDXDC1-205ENST00000535621 ZC3H11AO75152 810 aaKnown RBP eCLIP22.63■■□□□ 1.214e-9■■■■□ 21.2
PDXDC1-205ENST00000535621 GTF2F1P35269 517 aaKnown RBP eCLIP22.63■■□□□ 1.21
PDXDC1-205ENST00000535621 NKX3-2P78367 333 aa22.63■■□□□ 1.21
PDXDC1-205ENST00000535621 ARHGEF6Q15052 776 aa22.63■■□□□ 1.21
PDXDC1-205ENST00000535621 LHX8Q68G74 356 aa22.63■■□□□ 1.21
PDXDC1-205ENST00000535621 SYT11Q9BT88 431 aa22.63■■□□□ 1.21
PDXDC1-205ENST00000535621 KATNAL1Q9BW62 490 aa22.63■■□□□ 1.21
PDXDC1-205ENST00000535621 SMIM35A0A1B0GVV1 85 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 CYP2C9P11712 490 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 C7orf31Q8N865 590 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 OLIG1Q8TAK6 271 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 SCLT1Q96NL6 688 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 PI4K2AQ9BTU6 479 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 ADAMTS10Q9H324 1103 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 GRIN2DO15399 1336 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 URI1O94763 535 aaPredicted RBP22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 VNN1O95497 513 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 MFAP3P55082 362 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 BMS1Q14692 1282 aaKnown RBP22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 SRGAP1Q7Z6B7 1085 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 VPS36Q86VN1 386 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 THNSL1Q8IYQ7 743 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 TXLNBQ8N3L3 684 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 OR5B17Q8NGF7 314 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 TATDN2Q93075 761 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 CDHR5Q9HBB8 845 aa22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 HMX1Q9NP08 348 aaPredicted RBP22.62■■□□□ 1.21
PDXDC1-205ENST00000535621 LUC7LQ9NQ29 371 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms