RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 PRICKLE1Q96MT3 831 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 RSPH9Q9H1X1 276 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 FOXP1Q9H334 677 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ZDHHC18Q9NUE0 388 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CLIC5Q9NZA1 410 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 DKK3Q9UBP4 350 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CHKBQ9Y259 395 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 HBS1LQ9Y450 684 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ARIH1Q9Y4X5 557 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 UTYO14607 1347 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 LINC00854A0A1B0GVQ3 168 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 DDX3XO00571 662 aaKnown RBP eCLIP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 RNASEH1O60930 286 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 PALMO75781 387 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CASP1P29466 404 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 RPL26P61254 145 aaKnown RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CTAG1AP78358 180 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 DSG1Q02413 1049 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ARHGEF6Q15052 776 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NTRK3Q16288 839 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 DHRS4L2Q6PKH6 230 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 C11orf96Q7Z7L8 435 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 SATL1Q86VE3 508 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 VSIG1Q86XK7 387 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ADSSL1Q8N142 457 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 KBTBD3Q8NAB2 608 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 PIP4K2CQ8TBX8 421 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 SPATA17Q96L03 361 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 FMO2Q99518 471 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CCT7Q99832 543 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 NACAP1Q9BZK3 213 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ZMYND12Q9H0C1 365 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 SAR1AQ9NR31 198 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 ATAD3AQ9NVI7 634 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 CARD8Q9Y2G2 431 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 GIT1Q9Y2X7 761 aa8.5□□□□□ -1.05
C11orf88-203ENST00000529167 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
C11orf88-203ENST00000529167 MYH6P13533 1939 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 BTNL10A8MVZ5 291 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 COBLO75128 1261 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 OXSR1O95747 527 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 CYP2C9P11712 490 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 PTPN2P17706 415 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ZNF157P51786 506 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MCCD1P59942 119 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 PLCB3Q01970 1234 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 KCNMA1Q12791 1236 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ZCCHC8Q6NZY4 707 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 C1orf228Q6PIY5 440 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 TMTC3Q6ZXV5 915 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 INTS8Q75QN2 995 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ZNF804AQ7Z570 1209 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 PATL1Q86TB9 770 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 RASAL3Q86YV0 1011 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 RASGEF1CQ8N431 466 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ZNF296Q8WUU4 475 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 VMP1Q96GC9 406 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MAGEB18Q96M61 343 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 LRRC37BQ96QE4 947 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ECSITQ9BQ95 431 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ROPN1BQ9BZX4 212 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ROPN1Q9HAT0 212 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 TRPC7Q9HCX4 862 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 METTL5Q9NRN9 209 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 USP40Q9NVE5 1235 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 COMMD8Q9NX08 183 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 DBF4Q9UBU7 674 aaPredicted RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 RASAL2Q9UJF2 1139 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 TDRKHQ9Y2W6 561 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 STARD13Q9Y3M8 1113 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 XDHP47989 1333 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 A8MXQ7 604 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MAPK13O15264 365 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 SPTLC1O15269 473 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MAGEB2O15479 319 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 DCTN3O75935 186 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 KRT36O76013 467 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 PRCPP42785 496 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 DRG2P55039 364 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ANTXR2P58335 489 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 TRIM29Q14134 588 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MTHFSDQ2M296 383 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 COBLL1Q53SF7 1204 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 TYW1BQ6NUM6 668 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 BORAQ6PGQ7 559 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 DSTYKQ6XUX3 929 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 SFR1Q86XK3 245 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 FAM133AQ8N9E0 248 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 ERP27Q96DN0 273 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 TUBGCP2Q9BSJ2 902 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MFRPQ9BY79 579 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 CUEDC2Q9H467 287 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 CLK4Q9HAZ1 481 aaKnown RBP8.49□□□□□ -1.05
C11orf88-203ENST00000529167 MRGBPQ9NV56 204 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 PAG1Q9NWQ8 432 aa8.49□□□□□ -1.05
C11orf88-203ENST00000529167 A0A088AWK7 358 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms