RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PCDHGA9Q9Y5G4 932 aaKnown RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 PCDHGA3Q9Y5H0 932 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 EID1Q9Y6B2 187 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 PRG4Q92954 1404 aaPredicted RBP5.02□□□□□ -1.61
CD44-219ENST00000525685 UGGT2Q9NYU1 1516 aa5.02□□□□□ -1.61
CD44-219ENST00000525685 XDHP47989 1333 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 KLRG2A4D1S0 409 aaPredicted RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 NRP1O14786 923 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 PF4V1P10720 104 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 VCAM1P19320 739 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 CTSSP25774 331 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 TGFB2P61812 414 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 MCL1Q07820 350 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 PIN1Q13526 163 aaPredicted RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 ODF1Q14990 250 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 TAS1R1Q7RTX1 841 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 SLC41A1Q8IVJ1 513 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 CHPFQ8IZ52 775 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 FAM9AQ8IZU1 332 aaPredicted RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 CPA6Q8N4T0 437 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 MDGA1Q8NFP4 955 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 JPH3Q8WXH2 748 aaPredicted RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 HSPBAP1Q96EW2 488 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 CDC5LQ99459 802 aaKnown RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 MNTQ99583 582 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 C7orf25Q9BPX7 421 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 ZNF277Q9NRM2 450 aaPredicted RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 RBM12Q9NTZ6 932 aaKnown RBP5.01□□□□□ -1.61
CD44-219ENST00000525685 DISP1Q96F81 1524 aa5.01□□□□□ -1.61
CD44-219ENST00000525685 GOLGA3Q08378 1498 aa5□□□□□ -1.61
CD44-219ENST00000525685 SAMD9Q5K651 1589 aa5□□□□□ -1.61
CD44-219ENST00000525685 A0A1W2PR48 441 aa5□□□□□ -1.61
CD44-219ENST00000525685 AKAP10O43572 662 aa5□□□□□ -1.61
CD44-219ENST00000525685 MFAP3LO75121 409 aa5□□□□□ -1.61
CD44-219ENST00000525685 IPO13O94829 963 aaKnown RBP5□□□□□ -1.61
CD44-219ENST00000525685 ADH4P08319 380 aa5□□□□□ -1.61
CD44-219ENST00000525685 MAKP20794 623 aa5□□□□□ -1.61
CD44-219ENST00000525685 C5AR1P21730 350 aa5□□□□□ -1.61
CD44-219ENST00000525685 ECHS1P30084 290 aa5□□□□□ -1.61
CD44-219ENST00000525685 KRT85P78386 507 aa5□□□□□ -1.61
CD44-219ENST00000525685 DPTQ07507 201 aa5□□□□□ -1.61
CD44-219ENST00000525685 GJC2Q5T442 439 aaPredicted RBP5□□□□□ -1.61
CD44-219ENST00000525685 ABHD15Q6UXT9 468 aa5□□□□□ -1.61
CD44-219ENST00000525685 MIGA2Q7L4E1 593 aa5□□□□□ -1.61
CD44-219ENST00000525685 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
CD44-219ENST00000525685 WDR75Q8IWA0 830 aaKnown RBP5□□□□□ -1.61
CD44-219ENST00000525685 MB21D1Q8N884 522 aa5□□□□□ -1.61
CD44-219ENST00000525685 SNX33Q8WV41 574 aa5□□□□□ -1.61
CD44-219ENST00000525685 NRG4Q8WWG1 115 aa5□□□□□ -1.61
CD44-219ENST00000525685 ATXN2LQ8WWM7 1075 aaKnown RBP5□□□□□ -1.61
CD44-219ENST00000525685 NEU4Q8WWR8 484 aaPredicted RBP5□□□□□ -1.61
CD44-219ENST00000525685 ST8SIA2Q92186 375 aa5□□□□□ -1.61
CD44-219ENST00000525685 LARP4BQ92615 738 aaKnown RBP5□□□□□ -1.61
CD44-219ENST00000525685 DMRT3Q9NQL9 472 aa5□□□□□ -1.61
CD44-219ENST00000525685 SLC2A4RGQ9NR83 387 aa5□□□□□ -1.61
CD44-219ENST00000525685 NOB1Q9ULX3 412 aaKnown RBP5□□□□□ -1.61
CD44-219ENST00000525685 FAM171A2A8MVW0 826 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 GOLGA6L6A8MZA4 724 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 DTNBO60941 627 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 ENDOD1O94919 500 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 RPLP2P05387 115 aaKnown RBP4.99□□□□□ -1.61
CD44-219ENST00000525685 GYPEP15421 78 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 PTPN7P35236 360 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 MCAMP43121 646 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 FAM214AQ32MH5 1076 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 C19orf54Q5BKX5 351 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 DCAF17Q5H9S7 520 aaPredicted RBP4.99□□□□□ -1.61
CD44-219ENST00000525685 NAIF1Q69YI7 327 aaPredicted RBP4.99□□□□□ -1.61
CD44-219ENST00000525685 PDZD4Q76G19 769 aaPredicted RBP4.99□□□□□ -1.61
CD44-219ENST00000525685 RSPH3Q86UC2 560 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 FMNL3Q8IVF7 1028 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 RHOT1Q8IXI2 618 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 MSL3Q8N5Y2 521 aaKnown RBP4.99□□□□□ -1.61
CD44-219ENST00000525685 ZNF480Q8WV37 535 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 DPF2Q92785 391 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 HDAC10Q969S8 669 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 PGBD4Q96DM1 585 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 CLIP3Q96DZ5 547 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 CHFRQ96EP1 664 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 CCDC136Q96JN2 1154 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 GPRC5BQ9NZH0 403 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 TRPS1Q9UHF7 1281 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 HDAC5Q9UQL6 1122 aa4.99□□□□□ -1.61
CD44-219ENST00000525685 THRAP3Q9Y2W1 955 aaKnown RBP4.99□□□□□ -1.61
CD44-219ENST00000525685 ADCY10Q96PN6 1610 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 GRXCR1A8MXD5 290 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 FZD9O00144 591 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 HOXA3O43365 443 aaPredicted RBP4.98□□□□□ -1.61
CD44-219ENST00000525685 GNAT2P19087 354 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 CASRP41180 1078 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 ADKP55263 362 aaKnown RBP4.98□□□□□ -1.61
CD44-219ENST00000525685 WNT3AP56704 352 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 CCDC157Q569K6 752 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 RABL3Q5HYI8 236 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 TMEM240Q5SV17 173 aa4.98□□□□□ -1.61
CD44-219ENST00000525685 PPP4R3AQ6IN85 833 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms