RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 XRCC4Q13426 336 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 AUHQ13825 339 aaKnown RBP12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 CYB5D1Q6P9G0 228 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 MAP4K3Q8IVH8 894 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 HELQQ8TDG4 1101 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 SNF8Q96H20 258 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 ANAPC7Q9UJX3 599 aa12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 ZNFX1Q9P2E3 1918 aaKnown RBP12.13□□□□□ -0.47
NUDCD1-203ENST00000519607 ZNF536O15090 1300 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ASTN2O75129 1339 aaPredicted RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 TCRBV7S2A1N4TA0A589 114 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 DENND3A2RUS2 1198 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 NFIBO00712 420 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 CLDN3O15551 220 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 DKC1O60832 514 aaKnown RBP eCLIP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 DLATP10515 647 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 BPIFB4P59827 614 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ENPEPQ07075 957 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 SIX1Q15475 284 aaPredicted RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 TNFAIP8L3Q5GJ75 292 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ZNF677Q86XU0 584 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 LRRC34Q8IZ02 419 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 CPXCR1Q8N123 301 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 SEMA4DQ92854 862 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 SAAL1Q96ER3 474 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 GPRC5CQ9NQ84 441 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 COL20A1Q9P218 1284 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 PSME4Q14997 1843 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 BRWD3Q6RI45 1802 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 YDJCA8MPS7 323 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 PLSCR1O15162 318 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 WDR46O15213 610 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 POTEJP0CG39 1038 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 SCP2P22307 547 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ADSSP30520 456 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ABCD1P33897 745 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 NPTX2P47972 431 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 MRPS9P82933 396 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 GHRHRQ02643 423 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 GCNT1Q02742 428 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 CLEC16AQ2KHT3 1053 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 NSMFQ6X4W1 530 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 TRMT1LQ7Z2T5 733 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 RPAINQ86UA6 219 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 BBOF1Q8ND07 529 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 RDM1Q8NG50 284 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 IL31RAQ8NI17 732 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 PSPC1Q8WXF1 523 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 LPAR1Q92633 364 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ELAC2Q9BQ52 826 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 JPH2Q9BR39 696 aaPredicted RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 AVENQ9NQS1 362 aaPredicted RBP12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 C1orf112Q9NSG2 853 aa12.12□□□□□ -0.47
NUDCD1-203ENST00000519607 ANKRD63C9JTQ0 380 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SLC8A1P32418 973 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 CNGA2Q16280 664 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 FAM83AQ86UY5 434 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 GPD1LQ8N335 351 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SYTL5Q8TDW5 730 aaPredicted RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 TAS1R2Q8TE23 839 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 CLEC4DQ8WXI8 215 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 ARHGEF2Q92974 986 aaKnown RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 CCDC77Q9BR77 488 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 PLCD4Q9BRC7 762 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 TRAIPQ9BWF2 469 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 HAUS2Q9NVX0 235 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 H0YCG3 227 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 ACSL3O95573 720 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 ATF2P15336 505 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 EIF2AK2P19525 551 aaKnown RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 CHRNA5P30532 468 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 IFNAR2P48551 515 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SNX1Q13596 522 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 PTK6Q13882 451 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 PGM5Q15124 567 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 LONRF1Q17RB8 773 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 WDR44Q5JSH3 913 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SV2AQ7L0J3 742 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 TRPM8Q7Z2W7 1104 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 EXOC3L1Q86VI1 746 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 MAGEC3Q8TD91 643 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 C7orf43Q8WVR3 580 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 DDX1Q92499 740 aaKnown RBP12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 FBXL18Q96ME1 805 aa12.11□□□□□ -0.47
NUDCD1-203ENST00000519607 SCLT1Q96NL6 688 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms