RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 HOXA6P31267 233 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 CTHP32929 405 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 GPC3P51654 580 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 SEMA3BQ13214 749 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 DRP2Q13474 957 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 CCINQ13939 588 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 SLC35G1Q2M3R5 365 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 USP41Q3LFD5 358 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 TAF1BQ53T94 588 aaPredicted RBP3.68□□□□□ -1.82
CHD1-211ENST00000514344 CRYBG3Q68DQ2 2970 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 FUT10Q6P4F1 479 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 SAMD3Q8N6K7 520 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 ZFP42Q96MM3 310 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 ASB16Q96NS5 453 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 CORO1BQ9BR76 489 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 NUSAP1Q9BXS6 441 aaKnown RBP3.68□□□□□ -1.82
CHD1-211ENST00000514344 LRRCC1Q9C099 1032 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 ZNF302Q9NR11 478 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.68□□□□□ -1.82
CHD1-211ENST00000514344 PCDHB2Q9Y5E7 798 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 PCDHB15Q9Y5E8 787 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 KNTC1P50748 2209 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 LRBAP50851 2863 aa3.68□□□□□ -1.82
CHD1-211ENST00000514344 COL4A2P08572 1712 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 FAM149AA5PLN7 773 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 TRABD2BA6NFA1 517 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 CYTH3O43739 400 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SLC28A2O43868 658 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 HMMRO75330 724 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 WISP1O95388 367 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PAPLNO95428 1278 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 CCNE2O96020 404 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 NTRK1P04629 796 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 MLH1P40692 756 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SLC26A2P50443 739 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 DGKEP52429 567 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 TNK2Q07912 1038 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ITGB3BPQ13352 177 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 TRIP6Q15654 476 aaKnown RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 UBE2SQ16763 222 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ZNF484Q5JVG2 852 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 FAM43BQ6ZT52 329 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 PRICKLE2Q7Z3G6 844 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PIP4P1Q86T03 277 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 COLGALT2Q8IYK4 626 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 RNF168Q8IYW5 571 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 MTMR8Q96EF0 704 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ZSCAN10Q96SZ4 725 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 CLSTN3Q9BQT9 956 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SH2D3AQ9BRG2 576 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 TMEM175Q9BSA9 504 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SEMA4CQ9C0C4 833 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 TMEM74BQ9NUR3 256 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 MAD2L2Q9UI95 211 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PCDHB9Q9Y5E1 797 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PTPRBP23467 1997 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 MYH9P35579 1960 aaKnown RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 A0A087WZ62 844 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 CCDC163A0A0D9SF12 145 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ARNTLO00327 626 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SH3BP5O60239 455 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SKIP12755 728 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 BCKDHBP21953 392 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 EIF2S3P41091 472 aaKnown RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 CCR2P41597 374 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 SCNN1GP51170 649 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 LMAN2Q12907 356 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 LY6DQ14210 128 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 GRM4Q14833 912 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 DGKKQ5KSL6 1271 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 COLEC12Q5KU26 742 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 IFIT1BQ5T764 474 aaKnown RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 FAM160B1Q5W0V3 765 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PMS2CLQ68D20 193 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PCSK4Q6UW60 755 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 CATSPER4Q7RTX7 472 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 TTC30AQ86WT1 665 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 YAF2Q8IY57 180 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ZSCAN18Q8TBC5 510 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 PANK1Q8TE04 598 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ADAMTS14Q8WXS8 1223 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PGBD4Q96DM1 585 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 MBOAT7Q96N66 472 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 GAD1Q99259 594 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PAAF1Q9BRP4 392 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 FDXACB1Q9BRP7 624 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 FNIP2Q9P278 1114 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 KANSL3Q9P2N6 904 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ADAM28Q9UKQ2 775 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 KCNH3Q9ULD8 1083 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 HES2Q9Y543 173 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 PAXBP1Q9Y5B6 917 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 UBIAD1Q9Y5Z9 338 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 COL1A2P08123 1366 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 ZMYM2Q9UBW7 1377 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 KIF26AQ9ULI4 1882 aaPredicted RBP3.67□□□□□ -1.82
CHD1-211ENST00000514344 ITPR2Q14571 2701 aa3.67□□□□□ -1.82
CHD1-211ENST00000514344 VWA8A3KMH1 1905 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 PNMA6FA0A0J9YX94 578 aa3.66□□□□□ -1.82
CHD1-211ENST00000514344 HEPACAM2A8MVW5 462 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms