RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 C11orf70Q9BRQ4 267 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 TBC1D10AQ9BXI6 508 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 LRRC27Q9C0I9 530 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 ARHGEF38Q9NXL2 777 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 SEPT10Q9P0V9 454 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 PCSK1NQ9UHG2 260 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 PCDHA4Q9UN74 947 aa8.29□□□□□ -1.08
ATP2C1-208ENST00000504948 CCDC189A1A4V9 331 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 A6NJR5 290 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 AIM2O14862 343 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 KDM1AO60341 852 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 PLA2G4BP0C869 781 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 BCRP11274 1271 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 TAL1P17542 331 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 MARCKSL1P49006 195 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 HIRAP54198 1017 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 DAB2P98082 770 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 PLCB4Q15147 1175 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 DDB1Q16531 1140 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CDO1Q16878 200 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 KBTBD12Q3ZCT8 623 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 FAXCQ5TGI0 409 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 TMC3Q7Z5M5 1100 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 IQCKQ8N0W5 287 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CDC42EP4Q9H3Q1 356 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ARHGEF35A5YM69 484 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 K7ENM7 598 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CALUO43852 315 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 LDHBP07195 334 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 KRT19P08727 400 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 KRT4P19013 534 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 LIFRP42702 1097 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CASP4P49662 377 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ARPP19P56211 112 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 COASYQ13057 564 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 C1orf228Q6PIY5 440 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ZNF354CQ86Y25 554 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 FITM2Q8N6M3 262 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 GORASP1Q9BQQ3 440 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 MAK16Q9BXY0 300 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 PABPC3Q9H361 631 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ADAM22Q9P0K1 906 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 AP3B1O00203 1094 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 MT-CO1P00395 513 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 UCHL3P15374 230 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 MAGP20916 626 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 NMT1P30419 496 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 FNTAP49354 379 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 PSMD7P51665 324 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ITGA8P53708 1063 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ATP2C1P98194 919 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 MYL7Q01449 175 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ZC2HC1CQ53FD0 456 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 RINLQ6ZS11 566 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CDCA7Q9BWT1 371 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 UNKQ9C0B0 810 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ACSS2Q9NR19 701 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 FNDC3AQ9Y2H6 1198 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ALG6Q9Y672 507 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 H7C0C1 242 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 SEMA3EO15041 775 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 BANF1O75531 89 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CHRM1P11229 460 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ENO3P13929 434 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ATP5OP48047 213 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ROR2Q01974 943 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 Q4G0T1 1027 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 CCDC92Q53HC0 331 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 IFNEQ86WN2 208 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 WDR75Q8IWA0 830 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 NME8Q8N427 588 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 DIS3LQ8TF46 1054 aaKnown RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 TRPV6Q9H1D0 765 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 SEMA6BQ9H3T3 888 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 PPP1R1BQ9UD71 204 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 UTYO14607 1347 aa8.28□□□□□ -1.08
ATP2C1-208ENST00000504948 ABCC12Q96J65 1359 aa8.27□□□□□ -1.08
ATP2C1-208ENST00000504948 COMTP21964 271 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 SCARA5Q6ZMJ2 495 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 SAPCD2Q86UD0 394 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 RNF169Q8NCN4 708 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 KRT35Q92764 455 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 FAM111AQ96PZ2 611 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 PRPF18Q99633 342 aaKnown RBP8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 SYT15Q9BQS2 421 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 ETNK2Q9NVF9 386 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 WDR70Q9NW82 654 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 PIH1D1Q9NWS0 290 aaKnown RBP8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 ADA2Q9NZK5 511 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 WASF2Q9Y6W5 498 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 A0A1W2PQC6 194 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 WDR64B1ANS9 1081 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 ZBTB39O15060 712 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 SNX3O60493 162 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 MYCLP12524 364 aaPredicted RBP8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 FGFR3P22607 806 aa8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 GCLCP48506 637 aaPredicted RBP8.27□□□□□ -1.09
ATP2C1-208ENST00000504948 PEX5P50542 639 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms