RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ZBTB45Q96K62 511 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.017e-7■□□□□ 9.5
TCOF1-207ENST00000504761 PABPN1LA6NDY0 278 aaKnown RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SPATA31C1P0DKV0 1188 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 OAZ1P54368 228 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 C1orf186Q6ZWK4 172 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SV2AQ7L0J3 742 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 FAM71BQ8TC56 605 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 COG1Q8WTW3 980 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 CAPN6Q9Y6Q1 641 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 NPTXRO95502 500 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 ITGB3P05106 788 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 MUTP22033 750 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SDC4P31431 198 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 NAMPTP43490 491 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 GABPB1Q06547 395 aaPredicted RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 RRP1BQ14684 758 aaKnown RBP15.01□□□□□ -0.01
TCOF1-207ENST00000504761 AMHR2Q16671 573 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SLC35G1Q2M3R5 365 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SAMD3Q8N6K7 520 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 CABS1Q96KC9 395 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 INTS13Q9NVM9 706 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 SYNPO2Q9UMS6 1093 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 PCDHB2Q9Y5E7 798 aa15.01□□□□□ -0.01
TCOF1-207ENST00000504761 F5H423 210 aaPredicted RBP15□□□□□ -0.01
TCOF1-207ENST00000504761 GOLGA8MH3BSY2 632 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 SGPL1O95470 568 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 UBA1P22314 1058 aaKnown RBP15□□□□□ -0.01
TCOF1-207ENST00000504761 FGFR4P22455 802 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 AP3M2P53677 418 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 SARNPP82979 210 aaKnown RBP15□□□□□ -0.01
TCOF1-207ENST00000504761 RBP5P82980 135 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 ZNF507Q8TCN5 953 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 FBF1Q8TES7 1133 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 CPB2Q96IY4 423 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 FAM118BQ9BPY3 351 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 GTF2H1P32780 548 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 JAG1P78504 1218 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 CROCCP2Q86T23 111 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 BCAS4Q8TDM0 211 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 THAP2Q9H0W7 228 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 CYP3A7-CYP3A51PA0A087WV96 503 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 RPS6KA5O75582 802 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 LCP1P13796 627 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 CYP3A7P24462 503 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 RNF139Q8WU17 664 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 SLC35C1Q96A29 364 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 TMEM117Q9H0C3 514 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 DBR1Q9UK59 544 aaKnown RBP15□□□□□ -0.01
TCOF1-207ENST00000504761 IGKV6D-41A0A0C4DH26 115 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 OGTO15294 1046 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 KRT3P12035 628 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 BRD2P25440 801 aaKnown RBP15□□□□□ -0.01
TCOF1-207ENST00000504761 LGSNQ5TDP6 509 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 BBOF1Q8ND07 529 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 C18orf8Q96DM3 657 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 STRIP2Q9ULQ0 834 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 TCHHQ07283 1943 aa15□□□□□ -0.01
TCOF1-207ENST00000504761 TOM1L1O75674 476 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 ZBED1O96006 694 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 TGFB3P10600 412 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 C10orf67Q8IYJ2 551 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 HSD17B14Q9BPX1 270 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 CAPS2Q9BXY5 557 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-207ENST00000504761 TRAF3IP3Q9Y228 551 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 GOLGA8KD6RF30 607 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 TJP3O95049 919 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 MRPS9P82933 396 aaKnown RBP14.99□□□□□ -0.01
TCOF1-207ENST00000504761 LAMTOR4Q0VGL1 99 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 ITGB3BPQ13352 177 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-207ENST00000504761 RWDD4Q6NW29 188 aaKnown RBP14.99□□□□□ -0.01
TCOF1-207ENST00000504761 UBA3Q8TBC4 463 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 CCDC110Q8TBZ0 833 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 BTBD6Q96KE9 485 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 OSMRQ99650 979 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 ALG6Q9Y672 507 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 FRMPD4Q14CM0 1322 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 GPAT2Q6NUI2 795 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 DNAAF3Q8N9W5 541 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 ATP8B4Q8TF62 1192 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 HVCN1Q96D96 273 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 FGFBP2Q9BYJ0 223 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 ARFGEF2Q9Y6D5 1785 aa14.99□□□□□ -0.01
TCOF1-207ENST00000504761 CYP2C19P33261 490 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 PHBP35232 272 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 NME3Q13232 169 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 GEN1Q17RS7 908 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 CFAP157Q5JU67 520 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 ZNF571Q7Z3V5 609 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 RHOT1Q8IXI2 618 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 P3H4Q92791 437 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 RUNDC3BQ96NL0 473 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 IFT122Q9HBG6 1241 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 HOMER3Q9NSC5 361 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 RNF19AQ9NV58 838 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 UBIAD1Q9Y5Z9 338 aa14.98□□□□□ -0.01
TCOF1-207ENST00000504761 TRPM3Q9HCF6 1732 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-207ENST00000504761 SART1O43290 800 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms