RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 GLUD1P00367 558 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 YARSP54577 528 aaKnown RBP12.61□□□□□ -0.39
LRTM1-202ENST00000493075 STRN3Q13033 797 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 PTPN21Q16825 1174 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 ARSHQ5FYA8 562 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 KANK3Q6NY19 840 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 PDXDC1Q6P996 788 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 LILRA6Q6PI73 481 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 TMC5Q6UXY8 1006 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 ZPBP2Q6X784 338 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 RIN2Q8WYP3 895 aaPredicted RBP12.61□□□□□ -0.39
LRTM1-202ENST00000493075 MFSD14AQ96MC6 490 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 PLIN2Q99541 437 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 PAAF1Q9BRP4 392 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 TCHPQ9BT92 498 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 RAPGEFL1Q9UHV5 662 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 CDH22Q9UJ99 828 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 SMIM28A0A1B0GU29 152 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
LRTM1-202ENST00000493075 C2CD4DB7Z1M9 353 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 KIF4AO95239 1232 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 WEE2P0C1S8 567 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
LRTM1-202ENST00000493075 KCNE1P15382 129 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 SYT1P21579 422 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 ZNF568Q3ZCX4 644 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 MPZL3Q6UWV2 235 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 PIK3R5Q8WYR1 880 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 RABGGTAQ92696 567 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 DDX27Q96GQ7 796 aaKnown RBP12.6□□□□□ -0.39
LRTM1-202ENST00000493075 ACAP3Q96P50 834 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 TTPALQ9BTX7 342 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 CCSER1Q9C0I3 900 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 KCNH6Q9H252 994 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 MAN1C1Q9NR34 630 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 BLOC1S4Q9NUP1 217 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 SLC38A7Q9NVC3 462 aa12.6□□□□□ -0.39
LRTM1-202ENST00000493075 MORC2Q9Y6X9 1032 aaPredicted RBP12.6□□□□□ -0.39
LRTM1-202ENST00000493075 CCDC195A0A1B0GUA6 201 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 SPDYE4A6NLX3 237 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 M0R296 226 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 TGM5O43548 720 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 ABCD1P33897 745 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 DDIT3P35638 169 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 ZNF131P52739 623 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 NCKAP1LP55160 1127 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 SIGLEC14Q08ET2 396 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 RAD51AP2Q09MP3 1159 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 PTPAQ15257 358 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 UPP1Q16831 310 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 RTP2Q5QGT7 225 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 CCDC149Q6ZUS6 474 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 HFE2Q6ZVN8 426 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 OTOP3Q7RTS5 596 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 UBALD2Q8IYN6 164 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 TDRD5Q8NAT2 981 aaKnown RBP12.59□□□□□ -0.39
LRTM1-202ENST00000493075 LNX1Q8TBB1 728 aaPredicted RBP12.59□□□□□ -0.39
LRTM1-202ENST00000493075 RAD54LQ92698 747 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
LRTM1-202ENST00000493075 B3GALT6Q96L58 329 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 ZDHHC7Q9NXF8 308 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 CACNG4Q9UBN1 327 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 SRPRBQ9Y5M8 271 aaKnown RBP12.59□□□□□ -0.39
LRTM1-202ENST00000493075 CLIC4Q9Y696 253 aa12.59□□□□□ -0.39
LRTM1-202ENST00000493075 NPHP3-ACAD11A0A0J9YXS1 232 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 K7ELQ4 463 aaPredicted RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 CLDN3O15551 220 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 TRAPPC3O43617 180 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 B3GAT3O94766 335 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 PLCG1P19174 1290 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 FGFR3P22607 806 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 RPL9P32969 192 aaKnown RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 CLCNKBP51801 687 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 GRIN1Q05586 938 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 MCL1Q07820 350 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 RESTQ13127 1097 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 GLRA4Q5JXX5 417 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 CD300LGQ6UXG3 332 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 HAUS6Q7Z4H7 955 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 ZBTB33Q86T24 672 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 PALB2Q86YC2 1186 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 CEP120Q8N960 986 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 KREMEN2Q8NCW0 462 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 SNX21Q969T3 373 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 ZBTB45Q96K62 511 aaPredicted RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 SNX27Q96L92 541 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 CLSTN3Q9BQT9 956 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 ZSCAN16Q9H4T2 348 aaPredicted RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 WDR6Q9NNW5 1121 aaKnown RBP12.58□□□□□ -0.4
LRTM1-202ENST00000493075 CNTN3Q9P232 1028 aa12.58□□□□□ -0.4
LRTM1-202ENST00000493075 SORCS3Q9UPU3 1222 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms