RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PCDH11XQ9BZA7 1347 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 PCDH11YQ9BZA8 1340 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 RHPN2P1A8MT19 583 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 B4E1Z4 1266 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 PDE3AQ14432 1141 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 SUZ12Q15022 739 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 PRAMEF13Q5VWM6 474 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 UBE2Q1Q7Z7E8 422 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 DPP9Q86TI2 863 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 STK11IPQ8N1F8 1099 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 RTF1Q92541 710 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 ANKS1AQ92625 1134 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 TRIM11Q96F44 468 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 MKRN2Q9H000 416 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 LMAN2LQ9H0V9 348 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 DHX36Q9H2U1 1008 aaKnown RBP3.82□□□□□ -1.8
SMC6-208ENST00000481708 ADAM7Q9H2U9 754 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 CXorf56Q9H5V9 222 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 IPPKQ9H8X2 491 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 OBP2BQ9NPH6 170 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 IGSF9Q9P2J2 1179 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 AASSQ9UDR5 926 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 COL4A2P08572 1712 aa3.82□□□□□ -1.8
SMC6-208ENST00000481708 KIAA1671Q9BY89 1806 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 PGPEP1LA6NFU8 196 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 H0Y8X5 98 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 HTRA2O43464 458 aaPredicted RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 LRRN2O75325 713 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 A1BGP04217 495 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 NAT2P11245 290 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 CD68P34810 354 aaPredicted RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 BLMHQ13867 455 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 IFI16Q16666 785 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 SLC9C2Q5TAH2 1124 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 KAZNQ674X7 775 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 FAM117BQ6P1L5 589 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DARS2Q6PI48 645 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 RCBTB1Q8NDN9 531 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 Q8NFD4 153 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DNAJB8Q8NHS0 232 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 SH3RF2Q8TEC5 729 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DCAF4Q8WV16 495 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 HDAC2Q92769 488 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 TMEM41AQ96HV5 264 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 WASH6PQ9NQA3 447 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 SRP68Q9UHB9 627 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 ZNF652Q9Y2D9 606 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 TMEM98Q9Y2Y6 226 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 SPO11Q9Y5K1 396 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ERVV-2B6SEH9 535 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 STXBP3O00186 592 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 PLA2G6O60733 806 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ARL4DP49703 201 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 SNRPNP63162 240 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 KRT83P78385 493 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DSC2Q02487 901 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 CRY2Q49AN0 593 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 CT83Q5H943 113 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 CPZQ66K79 652 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 RPUSD3Q6P087 351 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 MOGAT3Q86VF5 341 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ANKRD18AQ8IVF6 992 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 CARNMT1Q8N4J0 409 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ZNF527Q8NB42 609 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 LILRB1Q8NHL6 650 aaPredicted RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 EAF2Q96CJ1 260 aaPredicted RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 C1GALT1C1Q96EU7 318 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 LAMA4Q16363 1823 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 KIAA1549LQ6ZVL6 1849 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 RNF123Q5XPI4 1314 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 KTN1Q86UP2 1357 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 RTL9Q8NET4 1388 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 LOXHD1Q8IVV2 1947 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 A0A087WZ62 844 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 A0A0B4J269 797 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ELL2O00472 640 aaPredicted RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 ADAMTS3O15072 1205 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DDX58O95786 925 aaKnown RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 ALAS1P13196 640 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 PDE6AP16499 860 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 HOXC12P31275 282 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 THBS2P35442 1172 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 NPTX2P47972 431 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DNM2P50570 870 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 FOXO4P98177 505 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 TUSC3Q13454 348 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ITPRIPL1Q6GPH6 555 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 DENND5BQ6ZUT9 1274 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 MIER2Q8N344 545 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 GDF15Q99988 308 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 FDXACB1Q9BRP7 624 aaPredicted RBP3.81□□□□□ -1.8
SMC6-208ENST00000481708 BRIP1Q9BX63 1249 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 GHITMQ9H3K2 345 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 TMEM160Q9NX00 188 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 ARHGAP28Q9P2N2 729 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 PCDHB1Q9Y5F3 818 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 NR2E3Q9Y5X4 410 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 GPR45Q9Y5Y3 372 aa3.81□□□□□ -1.8
SMC6-208ENST00000481708 PALLDQ8WX93 1383 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms