RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 MYMKA6NI61 221 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 C19orf67A6NJJ6 358 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 H0YCG3 227 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 K7ENM7 598 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 TRAK2O60296 914 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 TBCAO75347 108 aaKnown RBP23.18■■□□□ 1.3
LIME1-204ENST00000476183 URODP06132 367 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 PDIA4P13667 645 aaKnown RBP23.18■■□□□ 1.3
LIME1-204ENST00000476183 IGFBP6P24592 240 aaPredicted RBP23.18■■□□□ 1.3
LIME1-204ENST00000476183 XKR4Q5GH76 650 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 TMEM87AQ8NBN3 555 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 HASPINQ8TF76 798 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 CHST7Q9NS84 486 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 TBX20Q9UMR3 447 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 CITO14578 2027 aa23.18■■□□□ 1.3
LIME1-204ENST00000476183 SMIM28A0A1B0GU29 152 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 PPP6R2O75170 966 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 KIF4AO95239 1232 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 YEATS4O95619 227 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 NMT1P30419 496 aaKnown RBP23.17■■□□□ 1.3
LIME1-204ENST00000476183 SSTR3P32745 418 aaPredicted RBP23.17■■□□□ 1.3
LIME1-204ENST00000476183 GLUD2P49448 558 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 DSG1Q02413 1049 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 NOLC1Q14978 699 aaKnown RBP eCLIP23.17■■□□□ 1.3
LIME1-204ENST00000476183 SEZ6Q53EL9 994 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 DYMQ7RTS9 669 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 ZMAT2Q96NC0 199 aaKnown RBP23.17■■□□□ 1.3
LIME1-204ENST00000476183 CDH22Q9UJ99 828 aa23.17■■□□□ 1.3
LIME1-204ENST00000476183 TADA2AO75478 443 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 HOXB8P17481 243 aaPredicted RBP23.16■■□□□ 1.3
LIME1-204ENST00000476183 YARSP54577 528 aaKnown RBP23.16■■□□□ 1.3
LIME1-204ENST00000476183 MCL1Q07820 350 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 CCDC73Q6ZRK6 1079 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 SV2BQ7L1I2 683 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 DDX12PQ92771 950 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 DNAJC19Q96DA6 116 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 SNX27Q96L92 541 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 ACAP3Q96P50 834 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 EMILIN2Q9BXX0 1053 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 GOLGA2P5Q9HBQ8 144 aa23.16■■□□□ 1.3
LIME1-204ENST00000476183 TOPORSQ9NS56 1045 aaPredicted RBP23.16■■□□□ 1.3
LIME1-204ENST00000476183 TEX28O15482 410 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 KLRC2P26717 231 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 STAT6P42226 847 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 CLCN4P51793 760 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 GTF2BQ00403 316 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 SOX4Q06945 474 aaPredicted RBP23.15■■□□□ 1.3
LIME1-204ENST00000476183 KANK3Q6NY19 840 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 PDILTQ8N807 584 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 C12orf76Q8N812 135 aaPredicted RBP23.15■■□□□ 1.3
LIME1-204ENST00000476183 FEZF2Q8TBJ5 459 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 BICD1Q96G01 975 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 RXFP1Q9HBX9 757 aa23.15■■□□□ 1.3
LIME1-204ENST00000476183 PLXNA3P51805 1871 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 CLDN3O15551 220 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 PIGRP01833 764 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 CLCNKBP51801 687 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 SLC10A6Q3KNW5 377 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 USP41Q3LFD5 358 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 ZC2HC1CQ53FD0 456 aaPredicted RBP23.14■■□□□ 1.29
LIME1-204ENST00000476183 AXDND1Q5T1B0 1012 aaPredicted RBP23.14■■□□□ 1.29
LIME1-204ENST00000476183 KIAA1841Q6NSI8 718 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 CD300LGQ6UXG3 332 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 PPFIBP1Q86W92 1011 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 SFR1Q86XK3 245 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 EPHX3Q9H6B9 360 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 CNTN3Q9P232 1028 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 SSX2IPQ9Y2D8 614 aa23.14■■□□□ 1.29
LIME1-204ENST00000476183 SF3B1O75533 1304 aaKnown RBP eCLIP23.13■■□□□ 1.29
LIME1-204ENST00000476183 CUTAO60888 179 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 KCNE1P15382 129 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 SCP2P22307 547 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 LIG4P49917 911 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 TPRNQ4KMQ1 711 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 RTP2Q5QGT7 225 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 SLC39A4Q6P5W5 647 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 SHC4Q6S5L8 630 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 RIN2Q8WYP3 895 aaPredicted RBP23.13■■□□□ 1.29
LIME1-204ENST00000476183 ADAM7Q9H2U9 754 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 ST6GALNAC4Q9H4F1 302 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 DZANK1Q9NVP4 752 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 ZDHHC9Q9Y397 364 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 VWA8A3KMH1 1905 aa23.13■■□□□ 1.29
LIME1-204ENST00000476183 PDCD11Q14690 1871 aaKnown RBP23.13■■□□□ 1.29
LIME1-204ENST00000476183 HNRNPDLO14979 420 aaKnown RBP23.12■■□□□ 1.29
LIME1-204ENST00000476183 FAM189A1O60320 539 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 MATR3P43243 847 aaKnown RBP eCLIP23.12■■□□□ 1.29
LIME1-204ENST00000476183 DNM1Q05193 864 aaKnown RBP23.12■■□□□ 1.29
LIME1-204ENST00000476183 CBX2Q14781 532 aaPredicted RBP23.12■■□□□ 1.29
LIME1-204ENST00000476183 E2F4Q16254 413 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 UPP1Q16831 310 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 ZBTB41Q5SVQ8 909 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 RARS2Q5T160 578 aaKnown RBP23.12■■□□□ 1.29
LIME1-204ENST00000476183 ZNF720Q7Z2F6 126 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 MAP4K3Q8IVH8 894 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 C3orf58Q8NDZ4 430 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 C18orf25Q96B23 403 aaPredicted RBP23.12■■□□□ 1.29
LIME1-204ENST00000476183 FBXL18Q96ME1 805 aa23.12■■□□□ 1.29
LIME1-204ENST00000476183 POP1Q99575 1024 aaKnown RBP23.12■■□□□ 1.29
LIME1-204ENST00000476183 PHF7Q9BWX1 381 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms