RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CENPCQ03188 943 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARHGEF7Q14155 803 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARHGAP44Q17R89 818 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PLA2G4FQ68DD2 849 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 DDX1Q92499 740 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SUSD6Q92537 303 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCDC51Q96ER9 411 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 C1QTNF7Q9BXJ2 289 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 BACH2Q9BYV9 841 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMEM117Q9H0C3 514 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 TSPY26PQ9H489 355 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 RGL1Q9NZL6 768 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 SNX9Q9Y5X1 595 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM169AQ9Y6X4 670 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PER2O15055 1255 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCP110O43303 1012 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 LZTS3O60299 673 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAGEC1O60732 1142 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ATP1A1P05023 1023 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CA3P07451 260 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CLTAP09496 248 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CD58P19256 250 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAN1A1P33908 653 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 TUFMP49411 452 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 MXI1P50539 228 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 AP3M2P53677 418 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 USP41Q3LFD5 358 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM124AQ86V42 546 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 CD302Q8IX05 232 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 LRRN4CLQ8ND94 238 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 RAB3IL1Q8TBN0 382 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 MUC3BQ9H195 1237 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 RNPEPQ9H4A4 650 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM217BQ9NTX9 383 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 GPN3Q9UHW5 284 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 AGAP1Q9UPQ3 857 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 GIPC1O14908 333 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 HNF1BP35680 557 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 NPEPPSP55786 919 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 STX1AQ16623 288 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ME3Q16798 604 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZSCAN23Q3MJ62 389 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ARL13BQ3SXY8 428 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 EFCAB13Q8IY85 973 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM186BQ8IYM0 893 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF513Q8N8E2 541 aaPredicted RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 GDPD5Q8WTR4 605 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 NECTIN4Q96NY8 510 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 LGMNQ99538 433 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 PAIP2Q9BPZ3 127 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 FAM213AQ9BRX8 229 aa6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 ALG13Q9NP73 1137 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 TRMT13Q9NUP7 481 aaKnown RBP6.03□□□□□ -1.44
CDC42BPA-209ENST00000448940 GOLGA8IPA6NC78 632 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 GOLGA8JA6NMD2 632 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 PLA2G6O60733 806 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 APODP05090 189 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLURP2P0DP57 97 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 PSMC2P35998 433 aaKnown RBP6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 DNM1Q05193 864 aaKnown RBP6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 USP4Q13107 963 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 RASEFQ8IZ41 740 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 WDR48Q8TAF3 677 aa6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 NGRNQ9NPE2 291 aaKnown RBP6.02□□□□□ -1.44
CDC42BPA-209ENST00000448940 BAZ2BQ9UIF8 2168 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 POTECB2RU33 542 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 GFRA3O60609 400 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 RNF8O76064 485 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 ADCK5Q3MIX3 580 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 XXYLT1Q8NBI6 393 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 HPS3Q969F9 1004 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 NAF1Q96HR8 494 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 SPATA17Q96L03 361 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 PRDM16Q9HAZ2 1276 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 FAM208AQ9UK61 1670 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 C4BP0C0L5 1744 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 A0A1B0GVL5 298 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 CASTOR2A6NHX0 329 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 FSHRP23945 695 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 GFPT1Q06210 699 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 SCRN1Q12765 414 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 USP33Q8TEY7 942 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 CCT6BQ92526 530 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 SH3KBP1Q96B97 665 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 LENG1Q96BZ8 264 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 RBAKQ9NYW8 714 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 PLCH1Q4KWH8 1693 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 EYA4O95677 639 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 EZRP15311 586 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 GULP1Q9UBP9 304 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 ADCY5O95622 1261 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 NR2F2P24468 414 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 CRYBB1P53674 252 aaPredicted RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 MCM6Q14566 821 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 PABPC1LQ4VXU2 614 aaKnown RBP6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 RNF43Q68DV7 783 aa6.02□□□□□ -1.45
CDC42BPA-209ENST00000448940 POTEGQ6S5H5 508 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms