RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 ELNP15502 786 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 DRD4P21917 467 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 HALP42357 657 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 LIFRP42702 1097 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 NDUFA8P51970 172 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ANTXR2P58335 489 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 HPCAP84074 193 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 DHX9Q08211 1270 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 IFI16Q16666 785 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZNF792Q3KQV3 632 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 CFAP157Q5JU67 520 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 FAM209AQ5JX71 171 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 SYDE2Q5VT97 1194 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PPP4R3AQ6IN85 833 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 RASGRP2Q7LDG7 609 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ANKRD33Q7Z3H0 272 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 BPHLQ86WA6 291 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 MORC4Q8TE76 937 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 RAPGEF5Q92565 580 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 P3H4Q92791 437 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 DYNLL2Q96FJ2 89 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZNF274Q96GC6 653 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 DHTKD1Q96HY7 919 aaPredicted RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 CCDC43Q96MW1 224 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 SH3GL1Q99961 368 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ZKSCAN3Q9BRR0 538 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 TCHPQ9BT92 498 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PPP1R12CQ9BZL4 782 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 VCX3BQ9H321 246 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 VCX3AQ9NNX9 186 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 LUC7LQ9NQ29 371 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 PLCB1Q9NQ66 1216 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 ATAD3AQ9NVI7 634 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 CNOT8Q9UFF9 292 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 DDX25Q9UHL0 483 aaKnown RBP4.8□□□□□ -1.64
CDR1-201ENST00000370532 SLC12A6Q9UHW9 1150 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PLAAQ9Y263 795 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 USP20Q9Y2K6 914 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 COL4A6Q14031 1691 aa4.8□□□□□ -1.64
CDR1-201ENST00000370532 PFASO15067 1338 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 DNAJC25-GNG10A0A024R161 153 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TSPY2A6NKD2 308 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 GOLGA8AA7E2F4 631 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 KPNA6O60684 536 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 GSTA1P08263 222 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 FAM153BP0C7A2 387 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TROVE2P10155 538 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDR1-201ENST00000370532 RARAP10276 462 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 AKR1A1P14550 325 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 IL4RP24394 825 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 PDIA3P30101 505 aaKnown RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 CDK8P49336 464 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 PEX5P50542 639 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 PMS2P54278 862 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 CACNA2D1P54289 1103 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TFAP4Q01664 338 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 PTPN11Q06124 597 aaPredicted RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 STK3Q13188 491 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 BCL2A1Q16548 175 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 FAM153CQ494X1 144 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 USH1GQ495M9 461 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 GLE1Q53GS7 698 aaKnown RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 TMEM67Q5HYA8 995 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 FAM47AQ5JRC9 791 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 GKAP1Q5VSY0 366 aaPredicted RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 SPECC1LQ69YQ0 1117 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 CCSAPQ6IQ19 270 aaPredicted RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 TMEM214Q6NUQ4 689 aaKnown RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 CYP26C1Q6V0L0 522 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 RNF180Q86T96 592 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 SCUBE3Q8IX30 993 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 IQCKQ8N0W5 287 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 PCSK9Q8NBP7 692 aaKnown RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 RSPH1Q8WYR4 309 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 LENG1Q96BZ8 264 aaPredicted RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 GMCL1Q96IK5 515 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 HIC2Q96JB3 615 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 MAML3Q96JK9 1138 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 DNAJC1Q96KC8 554 aaKnown RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 ATP6V1G3Q96LB4 118 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 HAPLN3Q96S86 360 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 LBHD1Q9BQE6 289 aaPredicted RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 LRRC1Q9BTT6 524 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 SPATA16Q9BXB7 569 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TEX13BQ9BXU2 312 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 CCDC68Q9H2F9 335 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 SYNCQ9H7C4 482 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TXNRD2Q9NNW7 524 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TCP11L1Q9NUJ3 509 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 MRGBPQ9NV56 204 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TUBA8Q9NY65 449 aaPredicted RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 FAM153AQ9UHL3 310 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 GGT7Q9UJ14 662 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 RCOR1Q9UKL0 485 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TFR2Q9UP52 801 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 TRIM33Q9UPN9 1127 aa4.79□□□□□ -1.64
CDR1-201ENST00000370532 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.79□□□□□ -1.64
CDR1-201ENST00000370532 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
CDR1-201ENST00000370532 ZBED4O75132 1171 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms