RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GALCP54803 685 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 PPFIA1Q13136 1202 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 CRHR2Q13324 411 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 ATF7IP2Q5U623 682 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 EEF1DP3Q658K8 133 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 OLFML2BQ68BL8 750 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 MTHFD1LQ6UB35 978 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 PDCL2Q8N4E4 241 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 CEP120Q8N960 986 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 SHC3Q92529 594 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 GOLGA1Q92805 767 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 MMS19Q96T76 1030 aa24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 ABT1Q9ULW3 272 aaKnown RBP24.19■■□□□ 1.46
PDLIM2-203ENST00000339162 CLSTN1O94985 981 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 CALCAP01258 141 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 ENPEPQ07075 957 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 GRIK4Q16099 956 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 FBXO38Q6PIJ6 1188 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 NOP9Q86U38 636 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 FMNL3Q8IVF7 1028 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 SNX12Q9UMY4 172 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 PACSIN2Q9UNF0 486 aaPredicted RBP24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 ASAP2O43150 1006 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 PTPROQ16827 1216 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 MARCH8Q5T0T0 291 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 RPUSD2Q8IZ73 545 aaKnown RBP24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 LINC01465Q8N7H1 131 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 COG1Q8WTW3 980 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 CGRRF1Q99675 332 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 SETD4Q9NVD3 440 aa24.18■■□□□ 1.46
PDLIM2-203ENST00000339162 CTAGE15A4D2H0 777 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 MAGEB2O15479 319 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 CTAGE8P0CG41 777 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 ZNF865P0CJ78 1059 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 ZSCAN20P17040 1043 aaPredicted RBP24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 MCL1Q07820 350 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 ZNF568Q3ZCX4 644 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 TSHZ1Q6ZSZ6 1077 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 CTAGE6Q86UF2 777 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 CTAGE4Q8IX94 777 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 MSL3Q8N5Y2 521 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 EPS8L1Q8TE68 723 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 TLR10Q9BXR5 811 aa24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 ZCCHC17Q9NP64 241 aaKnown RBP24.17■■□□□ 1.46
PDLIM2-203ENST00000339162 GRID2IPA4D2P6 1211 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 OGTO15294 1046 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 MPZL3Q6UWV2 235 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 BRSK2Q8IWQ3 736 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 VTI1AQ96AJ9 217 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 ZFYVE28Q9HCC9 887 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 PTPRHQ9HD43 1115 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 C1orf112Q9NSG2 853 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 GNEQ9Y223 722 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 PDE2AO00408 941 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 HOXD8P13378 290 aaPredicted RBP24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 KRT5P13647 590 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 CTGFP29279 349 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 USP6NLQ92738 828 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 NOCTQ9UK39 431 aaKnown RBP24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 PCDHGC5Q9Y5F6 944 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 TLL2Q9Y6L7 1015 aa24.16■■□□□ 1.46
PDLIM2-203ENST00000339162 DCAF8L1A6NGE4 600 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 TNPO2O14787 897 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 HOXC6P09630 235 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 CHRNB2P17787 502 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 PROZP22891 400 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 TMOD1P28289 359 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 PHKA2P46019 1235 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 WDR44Q5JSH3 913 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 TLK2Q86UE8 772 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 TMEM192Q8IY95 271 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 NOA1Q8NC60 698 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 OSBPL9Q96SU4 736 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 PCDHB18PQ96TA0 734 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 APOBEC3GQ9HC16 384 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 CPSF3Q9UKF6 684 aaKnown RBP24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 PHACTR2O75167 634 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 PAXIP1Q6ZW49 1069 aaPredicted RBP24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 NLRP7Q8WX94 980 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 CPB2Q96IY4 423 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 SCLT1Q96NL6 688 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 GJD2Q9UKL4 321 aa24.15■■□□□ 1.46
PDLIM2-203ENST00000339162 ZNF236Q9UL36 1845 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 BTNL10A8MVZ5 291 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 MMEP08473 750 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 INHBEP58166 350 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 TMEM62Q0P6H9 643 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 CAGE1Q8TC20 777 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 MTMR12Q9C0I1 747 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 THAP2Q9H0W7 228 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 OSGEPQ9NPF4 335 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 SMARCAL1Q9NZC9 954 aa24.14■■□□□ 1.46
PDLIM2-203ENST00000339162 COL1A2P08123 1366 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 A6NJR5 290 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 CST3P01034 146 aaPredicted RBP24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 CYP11B1P15538 503 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 GCNT1Q02742 428 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 ARHGEF26Q96DR7 871 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 CDT1Q9H211 546 aa24.14■■□□□ 1.45
PDLIM2-203ENST00000339162 EHD2Q9NZN4 543 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms