RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 CYTH2Q99418 400 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 SH3GLB2Q9NR46 395 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 ATP8A2Q9NTI2 1148 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 R3HDM2Q9Y2K5 976 aaKnown RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 A6NJR5 290 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 TBX10O75333 385 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 LDHBP07195 334 aaKnown RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 MMP10P09238 476 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 ACADSP16219 412 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 VCAM1P19320 739 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 MYBPC3Q14896 1274 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 SMAD1Q15797 465 aaKnown RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 CNPY1Q3B7I2 92 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 TMEM119Q4V9L6 283 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 PHLDB3Q6NSJ2 640 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 ARHGEF19Q8IW93 802 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 ADGRF4Q8IZF3 695 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 SNRNP27Q8WVK2 155 aaKnown RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 WDR60Q8WVS4 1066 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 JDP2Q8WYK2 163 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 SYN2Q92777 582 aaPredicted RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 MMADHCQ9H3L0 296 aaPredicted RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 UBE2TQ9NPD8 197 aaPredicted RBP11.85□□□□□ -0.51
CCDC87-201ENST00000333861 TXLNGQ9NUQ3 528 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 ZNF831Q5JPB2 1677 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 ZNF804BA4D1E1 1349 aa11.85□□□□□ -0.51
CCDC87-201ENST00000333861 SGPL1O95470 568 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 FGFR1P11362 822 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 WDR4P57081 412 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 USP46P62068 366 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 KRT17Q04695 432 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 GIT2Q14161 759 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 RRP1BQ14684 758 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 FASTKD3Q14CZ7 662 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 SF3B3Q15393 1217 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 ACSBG2Q5FVE4 666 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 MTDHQ86UE4 582 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 SCYL3Q8IZE3 742 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 MYCT1Q8N699 235 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 SLC5A5Q92911 643 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 CAMKK2Q96RR4 588 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 UBN1Q9NPG3 1134 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 USP20Q9Y2K6 914 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 A0A1W2PRG0 241 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 CFAP69A5D8W1 941 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 THAP12O43422 761 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 CREB3O43889 395 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 GCLMP48507 274 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 MTFR1Q15390 333 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 ZFYVE27Q5T4F4 411 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 TPH2Q8IWU9 490 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 SLC25A41Q8N5S1 370 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 ZFAND2BQ8WV99 257 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 DHX38Q92620 1227 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 IFT43Q96FT9 208 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 TUBGCP5Q96RT8 1024 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 PCDHB18PQ96TA0 734 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 MTA3Q9BTC8 594 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 LRMDAQ9H2I8 198 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 DHX36Q9H2U1 1008 aaKnown RBP11.84□□□□□ -0.51
CCDC87-201ENST00000333861 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 STK17AQ9UEE5 414 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 ZBTB21Q9ULJ3 1066 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 ASTN1O14525 1302 aa11.84□□□□□ -0.51
CCDC87-201ENST00000333861 TMEM150BA6NC51 233 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 CES2O00748 559 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 ZBED4O75132 1171 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 TJP3O95049 919 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 FUT4P22083 530 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 BAG6P46379 1132 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 ITGA8P53708 1063 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 POLGP54098 1239 aaPredicted RBP11.83□□□□□ -0.51
CCDC87-201ENST00000333861 PPP2R5CQ13362 524 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 KNOP1Q1ED39 458 aaKnown RBP11.83□□□□□ -0.51
CCDC87-201ENST00000333861 SLC10A5Q5PT55 438 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 KAZNQ674X7 775 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 GLIS1Q8NBF1 620 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 PHF12Q96QT6 1004 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 EDEM3Q9BZQ6 932 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 JMJD4Q9H9V9 463 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 NKIRAS1Q9NYS0 192 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 NAALADL1Q9UQQ1 740 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 USTQ9Y2C2 406 aa11.83□□□□□ -0.51
CCDC87-201ENST00000333861 A0A1W2PPM1 405 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.52
CCDC87-201ENST00000333861 LAD1O00515 517 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 ZSCAN9O15535 394 aaPredicted RBP11.83□□□□□ -0.52
CCDC87-201ENST00000333861 TM4SF1P30408 202 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
CCDC87-201ENST00000333861 GALNT17Q6IS24 598 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 RNF207Q6ZRF8 634 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 VPS36Q86VN1 386 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 ATL2Q8NHH9 583 aa11.83□□□□□ -0.52
CCDC87-201ENST00000333861 ABTB1Q969K4 478 aaPredicted RBP11.83□□□□□ -0.52
CCDC87-201ENST00000333861 NMD3Q96D46 503 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms