RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 SMAPO00193 183 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 FOXN3O00409 490 aaPredicted RBP14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 MAFGO15525 162 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 RASA4O43374 803 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 SORBS3O60504 671 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 HNRNPCL1O60812 293 aaKnown RBP14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 SKIP12755 728 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 SLC18A1P54219 525 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 STAT4Q14765 748 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 ARHGAP44Q17R89 818 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 SNX30Q5VWJ9 437 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 TXNRD3Q86VQ6 643 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 CPNE8Q86YQ8 564 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 NRG4Q8WWG1 115 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 BCAS3Q9H6U6 928 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 PCMTD2Q9NV79 361 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 DNM3Q9UQ16 869 aa14.4□□□□□ -0.1
RPUSD4-201ENST00000298317 MEIS1O00470 390 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 FSCN2O14926 492 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 ATP9AO75110 1047 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 LRRN2O75325 713 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 RPA1P27694 616 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 POLE2P56282 527 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 GSTO1P78417 241 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 PDK4Q16654 411 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 TAF1BQ53T94 588 aaPredicted RBP14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 SLC45A4Q5BKX6 768 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 PHLDB3Q6NSJ2 640 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 RFWD3Q6PCD5 774 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 SESTD1Q86VW0 696 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 RELL1Q8IUW5 271 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 SLFN12Q8IYM2 578 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 TRAIPQ9BWF2 469 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 UBN1Q9NPG3 1134 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 CYLDQ9NQC7 956 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 SAR1AQ9NR31 198 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 PLIN4Q96Q06 1357 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 CYP3A7-CYP3A51PA0A087WV96 503 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 A0A1B0GVG6 124 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 EIF3DO15371 548 aaKnown RBP eCLIP14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 TJP3O95049 919 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 CYP3A7P24462 503 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 DYNC1I2Q13409 638 aaKnown RBP14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 SPARCL1Q14515 664 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 CTC1Q2NKJ3 1217 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 SGO2Q562F6 1265 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 DNAJC14Q6Y2X3 702 aaPredicted RBP14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 TRABD2AQ86V40 505 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 C1orf54Q8WWF1 131 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 PSPC1Q8WXF1 523 aaKnown RBP14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 GATA6Q92908 595 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 FAM192AQ9GZU8 254 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 ANKRD2Q9GZV1 360 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 IKZF4Q9H2S9 585 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 GRID1Q9ULK0 1009 aa14.39□□□□□ -0.11
RPUSD4-201ENST00000298317 CLDN3O15551 220 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 SPOPO43791 374 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 KCNA3P22001 575 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 SESN3P58005 492 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 MYL7Q01449 175 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CDR2Q01850 454 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 TMED2Q15363 201 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CCDC125Q86Z20 511 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 ADGRF4Q8IZF3 695 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 SCG3Q8WXD2 468 aaKnown RBP14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 AZIN2Q96A70 460 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 RBM41Q96IZ5 413 aaKnown RBP14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 RTFDC1Q9BY42 306 aaPredicted RBP14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CHORDC1Q9UHD1 332 aaPredicted RBP14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 ZFP69BQ9UJL9 534 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 PDLIM1O00151 329 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 C2CD2LO14523 706 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 TBCAO75347 108 aaKnown RBP14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 TRIM49P0CI25 452 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 TRIM49CP0CI26 452 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 MAN1A1P33908 653 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CACNA2D1P54289 1103 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 NR1H3Q13133 447 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 RCN1Q15293 331 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CCDC6Q16204 474 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 GRIK5Q16478 980 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 DSTYKQ6XUX3 929 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 ATL2Q8NHH9 583 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 ERMNQ8TAM6 284 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 LMO3Q8TAP4 145 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 ETNPPLQ8TBG4 499 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 PWWP2AQ96N64 755 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CCDC77Q9BR77 488 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CADM1Q9BY67 442 aaKnown RBP14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 PSTPIP2Q9H939 334 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 CHST7Q9NS84 486 aa14.38□□□□□ -0.11
RPUSD4-201ENST00000298317 WNK3Q9BYP7 1800 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 A0A1W2PRG0 241 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 MAGEA13PA6NCF6 341 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ABHD2P08910 425 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ATF2P15336 505 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms