RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 CYP3A5P20815 502 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 NCOA4Q13772 614 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 KRT31Q15323 416 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 DNAJC24Q6P3W2 148 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 LRRC43Q8N309 656 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 HDAC6Q9UBN7 1215 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 AGAP1Q9UPQ3 857 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 TAF1LQ8IZX4 1826 aa8.34□□□□□ -1.07
EPHA4-201ENST00000281821 COBLO75128 1261 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 FGF19O95750 216 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 CPB1P15086 417 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 KPNA1P52294 538 aaPredicted RBP8.34□□□□□ -1.08
EPHA4-201ENST00000281821 CST9Q5W186 159 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 LRRC8DQ7L1W4 858 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 VSTM4Q8IW00 320 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 PDCL2Q8N4E4 241 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 MED15Q96RN5 788 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 NLRC4Q9NPP4 1024 aa8.34□□□□□ -1.08
EPHA4-201ENST00000281821 LSM7Q9UK45 103 aaKnown RBP8.34□□□□□ -1.08
EPHA4-201ENST00000281821 PGK1P00558 417 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 FMO5P49326 533 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ZNF135P52742 658 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ARHGAP1Q07960 439 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 RRP1BQ14684 758 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 PSMD6Q15008 389 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TRAPPC11Q7Z392 1133 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SH3RF1Q7Z6J0 888 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 U2AF1L4Q8WU68 220 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 HEXIM2Q96MH2 286 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 NTPCRQ9BSD7 190 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 RUSC1Q9BVN2 902 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 PIDD1Q9HB75 910 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 AMFRQ9UKV5 643 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 FAN1Q9Y2M0 1017 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 PCDHB2Q9Y5E7 798 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 CHD4Q14839 1912 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 QSER1Q2KHR3 1735 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 GSTTP1A0A1W2PQM5 241 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SSU72P8A0A1W2PR75 194 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ELNP15502 786 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TUFMP49411 452 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 KCNA10Q16322 511 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 IL31RAQ8NI17 732 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SLITRK1Q96PX8 696 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TXNRD2Q9NNW7 524 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 PITPNM1O00562 1244 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ZNF286BP0CG31 522 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TCP1P17987 556 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ALDH1A3P47895 512 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 STK4Q13043 487 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ERICH1Q86X53 443 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 DNAJB3Q8WWF6 145 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ERGIC2Q96RQ1 377 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 INTS2Q9H0H0 1204 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 RNPEPQ9H4A4 650 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 UBE2TQ9NPD8 197 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 DNAJC12Q9UKB3 198 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 CDY2AQ9Y6F7 541 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 XYLBO75191 536 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SGPL1O95470 568 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 ZNF131P52739 623 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 FIBCD1Q8N539 461 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 BBOF1Q8ND07 529 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 RAB20Q9NX57 234 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SLC4A7Q9Y6M7 1214 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 CCDC88AQ3V6T2 1871 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TNRC6CQ9HCJ0 1690 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 PABPN1LA6NDY0 278 aaKnown RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SFI1A8K8P3 1242 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 FGBP02675 491 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TFDP2Q14188 446 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 KIZQ2M2Z5 673 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 WDR72Q3MJ13 1102 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 LRRC31Q6UY01 552 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 TRIM50Q86XT4 487 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 SPATA2LQ8IUW3 424 aaPredicted RBP8.33□□□□□ -1.08
EPHA4-201ENST00000281821 BLOC1S4Q9NUP1 217 aa8.33□□□□□ -1.08
EPHA4-201ENST00000281821 UQCRHLA0A096LP55 91 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 A0A1W2PQJ5 194 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 MACROD2A1Z1Q3 448 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 APOEP02649 317 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 UQCRHP07919 91 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CYBAP13498 195 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 ARL4AP40617 200 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 GCLMP48507 274 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 ATN1P54259 1190 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 OSTNP61366 133 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 GCNT1Q02742 428 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 NDUFAF2Q8N183 169 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 OSMRQ99650 979 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 UXTQ9UBK9 157 aaPredicted RBP8.32□□□□□ -1.08
EPHA4-201ENST00000281821 PTCH2Q9Y6C5 1203 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CTAGE15A4D2H0 777 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 BAIAP3O94812 1187 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 ATG7O95352 703 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CLTBP09497 229 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 CTAGE8P0CG41 777 aa8.32□□□□□ -1.08
EPHA4-201ENST00000281821 SARNPP82979 210 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms