RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	PRE7	P23724	241 aa	Known RBP	6.88	□□□□□ -1.31
TGA1	tA(UGC)A	VPS17	P32913	551 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	ECM4	P36156	370 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	PAU24	P38155	120 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	MED8	P38304	223 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	AVT6	P40074	448 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YER121W	P40076	114 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	PAM16	P42949	149 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YGL204C	P53089	101 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YIP4	P53093	235 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YNR048W	P53740	393 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YLR152C	P54072	576 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YMR252C	Q04814	134 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YPR098C	Q06089	161 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	YLR346C	Q06139	101 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	TSR2	Q06672	205 aa	Known RBP	6.88	□□□□□ -1.31
TGA1	tA(UGC)A	RFU1	Q08003	200 aa		6.88	□□□□□ -1.31
TGA1	tA(UGC)A	RPL39	P04650	51 aa		6.87	□□□□□ -1.31
TGA1	tA(UGC)A	RPL15A	P05748	204 aa	Known RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	PHO4	P07270	312 aa	Known RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	RPL30	P14120	105 aa	Known RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	SAG1	P20840	650 aa		6.87	□□□□□ -1.31
TGA1	tA(UGC)A	YHL044W	P38727	235 aa		6.87	□□□□□ -1.31
TGA1	tA(UGC)A	ARO9	P38840	513 aa	Predicted RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	PDS1	P40316	373 aa	Predicted RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	SUT1	P53032	299 aa	Known RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	PXR1	P53335	271 aa	Predicted RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	RPL15B	P54780	204 aa	Predicted RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	USB1	Q12208	290 aa	Known RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	YLR108C	Q12259	485 aa		6.87	□□□□□ -1.31
TGA1	tA(UGC)A	TY1A-NL1	Q12391	440 aa	Known RBP	6.87	□□□□□ -1.31
TGA1	tA(UGC)A	YER145C-A	A0A023PYF4	145 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	AFG1	P32317	509 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	DOA4	P32571	926 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	ANR2	P36090	516 aa	Predicted RBP	6.86	□□□□□ -1.31
TGA1	tA(UGC)A	NVJ1	P38881	321 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	FMC1	P40491	155 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	GVP36	P40531	326 aa	Known RBP	6.86	□□□□□ -1.31
TGA1	tA(UGC)A	YJL016W	P47072	561 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	YGL159W	P53110	370 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	SLI1	P53304	468 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	GPI17	Q04080	534 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	YDR514C	Q04408	483 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	LUC7	Q07508	261 aa	Predicted RBP	6.86	□□□□□ -1.31
TGA1	tA(UGC)A	FRE8	Q12209	686 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	YCL048W-A	Q2V2Q2	79 aa		6.86	□□□□□ -1.31
TGA1	tA(UGC)A	MATALPHA1	P0CY06	175 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	HMLALPHA1	P0CY07	175 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	APA2	P22108	325 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	FUN26	P31381	517 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	VMA6	P32366	345 aa	Known RBP	6.85	□□□□□ -1.31
TGA1	tA(UGC)A	PPZ2	P33329	710 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	SSZ1	P38788	538 aa	Known RBP	6.85	□□□□□ -1.31
TGA1	tA(UGC)A	CTR2	P38865	189 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	DLS1	P40366	167 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	BUD8	P41698	603 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	GZF3	P42944	551 aa	Known RBP	6.85	□□□□□ -1.31
TGA1	tA(UGC)A	ERJ5	P43613	295 aa	Predicted RBP	6.85	□□□□□ -1.31
TGA1	tA(UGC)A	SCW11	P53189	542 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	NRK1	P53915	240 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	RNH201	P53942	307 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	MOT3	P54785	490 aa	Known RBP	6.85	□□□□□ -1.31
TGA1	tA(UGC)A	SPR28	Q04921	423 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	HEM25	Q07534	307 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	YPR1	Q12458	312 aa		6.85	□□□□□ -1.31
TGA1	tA(UGC)A	YLR358C	O13565	187 aa		6.84	□□□□□ -1.31
TGA1	tA(UGC)A	MET17	P06106	444 aa		6.84	□□□□□ -1.31
TGA1	tA(UGC)A	SGA1	P08019	549 aa		6.84	□□□□□ -1.31
TGA1	tA(UGC)A	SGN1	P40561	250 aa	Known RBP RIP-Chip data	6.84	□□□□□ -1.31	not detected
TGA1	tA(UGC)A	ABM1	P47146	123 aa		6.84	□□□□□ -1.31
TGA1	tA(UGC)A	NSA1	P53136	463 aa	Predicted RBP	6.84	□□□□□ -1.31
TGA1	tA(UGC)A	NMA1	Q06178	401 aa	Known RBP	6.84	□□□□□ -1.31
TGA1	tA(UGC)A	QCR7	P00128	127 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	GCD1	P09032	578 aa	Predicted RBP	6.83	□□□□□ -1.32
TGA1	tA(UGC)A	RPB9	P27999	122 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	PAU2	P32612	120 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	MRPL36	P36531	177 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	TCM62	P38228	572 aa	Known RBP	6.83	□□□□□ -1.32
TGA1	tA(UGC)A	SSH1	P38353	490 aa	Known RBP	6.83	□□□□□ -1.32
TGA1	tA(UGC)A	RMD6	P39975	231 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	YND1	P40009	630 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	RIO2	P40160	425 aa	Known RBP	6.83	□□□□□ -1.32
TGA1	tA(UGC)A	YJL218W	P40892	196 aa	Known RBP	6.83	□□□□□ -1.32
TGA1	tA(UGC)A	GON7	P46984	123 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	YAE1	P47118	141 aa	Predicted RBP	6.83	□□□□□ -1.32
TGA1	tA(UGC)A	BNA2	P47125	453 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	PMT5	P52867	743 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	GEP7	P53171	287 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	NEJ1	Q06148	342 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	RBD2	Q12270	262 aa		6.83	□□□□□ -1.32
TGA1	tA(UGC)A	SIR2	P06700	562 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	ADK1	P07170	222 aa	Known RBP	6.82	□□□□□ -1.32
TGA1	tA(UGC)A	AHC2	P25649	128 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	ERG24	P32462	438 aa	Known RBP	6.82	□□□□□ -1.32
TGA1	tA(UGC)A	VMA11	P32842	164 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	MTH1	P35198	433 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	PCL6	P40038	420 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	YJR120W	P47157	116 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	TAF4	P50105	388 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	YKR005C	Q02203	525 aa		6.82	□□□□□ -1.32

Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms