RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 SPT4P32914 102 aaPredicted RBP-0.3□□□□□ -2.46
snR55snR55 DAD2P36162 133 aa-0.3□□□□□ -2.46
snR55snR55 SXM1Q04175 944 aaKnown RBP-0.3□□□□□ -2.46
snR55snR55 YMR316C-AI2HB70 103 aa-0.31□□□□□ -2.46
snR55snR55 OAC1P32332 324 aa-0.31□□□□□ -2.46
snR55snR55 NPT1P39683 429 aaKnown RBP-0.31□□□□□ -2.46
snR55snR55 AGE2P40529 298 aa-0.31□□□□□ -2.46
snR55snR55 YKE4P40544 346 aa-0.31□□□□□ -2.46
snR55snR55 YMR209CQ03648 457 aa-0.31□□□□□ -2.46
snR55snR55 YMR007WQ03675 126 aa-0.31□□□□□ -2.46
snR55snR55 AKR2Q12013 749 aa-0.31□□□□□ -2.46
snR55snR55 SKS1Q12505 502 aa-0.31□□□□□ -2.46
snR55snR55 NBL1Q3E7Y6 73 aa-0.31□□□□□ -2.46
snR55snR55 Q0255P03881 472 aa-0.32□□□□□ -2.46
snR55snR55 QCR8P08525 94 aa-0.32□□□□□ -2.46
snR55snR55 CAM1P29547 415 aaKnown RBP-0.32□□□□□ -2.46
snR55snR55 UIP5P36137 443 aa-0.32□□□□□ -2.46
snR55snR55 ERV15P38312 142 aa-0.32□□□□□ -2.46
snR55snR55 YER076CP40049 302 aa-0.32□□□□□ -2.46
snR55snR55 DBP6P53734 629 aaKnown RBP-0.32□□□□□ -2.46
snR55snR55 ASI3P53983 676 aa-0.32□□□□□ -2.46
snR55snR55 SAM4Q08985 325 aaKnown RBP-0.32□□□□□ -2.46
snR55snR55 USB1Q12208 290 aaKnown RBP-0.32□□□□□ -2.46
snR55snR55 RPC37P36121 282 aa-0.33□□□□□ -2.46
snR55snR55 YGR219WP53307 113 aa-0.33□□□□□ -2.46
snR55snR55 ERV29P53337 310 aa-0.33□□□□□ -2.46
snR55snR55 ATC1Q04005 294 aa-0.33□□□□□ -2.46
snR55snR55 TAF9Q05027 157 aa-0.33□□□□□ -2.46
snR55snR55 PRS4P38063 326 aaPredicted RBP-0.34□□□□□ -2.46
snR55snR55 LIN1P38852 340 aaPredicted RBP-0.34□□□□□ -2.46
snR55snR55 ARC15P40518 154 aaRIP-Chip data-0.34□□□□□ -2.46not detected
snR55snR55 IBA57P47158 497 aa-0.34□□□□□ -2.46
snR55snR55 DBP9Q06218 594 aaKnown RBP-0.34□□□□□ -2.46
snR55snR55 RNR2P09938 399 aaKnown RBP-0.35□□□□□ -2.47
snR55snR55 SWE1P32944 819 aa-0.35□□□□□ -2.47
snR55snR55 RCN1P36054 211 aa-0.35□□□□□ -2.47
snR55snR55 SVP26P38869 228 aa-0.35□□□□□ -2.47
snR55snR55 YMR111CQ04461 462 aaPredicted RBP-0.35□□□□□ -2.47
snR55snR55 COX5AP00424 153 aa-0.36□□□□□ -2.47
snR55snR55 RPC40P07703 335 aaKnown RBP-0.36□□□□□ -2.47
snR55snR55 YKL063CP35725 167 aa-0.36□□□□□ -2.47
snR55snR55 FET3P38993 636 aa-0.36□□□□□ -2.47
snR55snR55 SER33P40510 469 aa-0.36□□□□□ -2.47
snR55snR55 SLD7Q08457 257 aa-0.36□□□□□ -2.47
snR55snR55 EMP46Q12396 444 aa-0.36□□□□□ -2.47
snR55snR55 YAL064W-BO13512 126 aa-0.37□□□□□ -2.47
snR55snR55 GAL3P13045 520 aa-0.37□□□□□ -2.47
snR55snR55 TAL1P15019 335 aaKnown RBP-0.37□□□□□ -2.47
snR55snR55 SEC22P22214 214 aa-0.37□□□□□ -2.47
snR55snR55 RNA15P25299 296 aaPredicted RBP-0.37□□□□□ -2.47
snR55snR55 EBP2P36049 427 aaKnown RBP-0.37□□□□□ -2.47
snR55snR55 SWD2P36104 329 aaPredicted RBP-0.37□□□□□ -2.47
snR55snR55 YHR125WP38831 101 aa-0.37□□□□□ -2.47
snR55snR55 PEX18P38855 283 aa-0.37□□□□□ -2.47
snR55snR55 CUE3P53137 624 aaKnown RBP-0.37□□□□□ -2.47
snR55snR55 YGR026WP53217 278 aa-0.37□□□□□ -2.47
snR55snR55 MAL13P53338 473 aa-0.37□□□□□ -2.47
snR55snR55 CTF19Q02732 369 aa-0.37□□□□□ -2.47
snR55snR55 NFI1Q12216 726 aa-0.37□□□□□ -2.47
snR55snR55 FRE6Q12473 712 aa-0.37□□□□□ -2.47
snR55snR55 AI5_BETAQ9ZZX0 354 aa-0.37□□□□□ -2.47
snR55snR55 CWP1P28319 239 aa-0.38□□□□□ -2.47
snR55snR55 SSH1P38353 490 aaKnown RBP-0.38□□□□□ -2.47
snR55snR55 YHL049CP38722 271 aa-0.38□□□□□ -2.47
snR55snR55 YHR180WP38868 163 aa-0.38□□□□□ -2.47
snR55snR55 EOS1P53938 366 aa-0.38□□□□□ -2.47
snR55snR55 YPL077CQ02831 240 aa-0.38□□□□□ -2.47
snR55snR55 NEJ1Q06148 342 aa-0.38□□□□□ -2.47
snR55snR55 ASR1Q06834 288 aa-0.38□□□□□ -2.47
snR55snR55 YPR011CQ12251 326 aa-0.38□□□□□ -2.47
snR55snR55 BBP1Q12365 385 aa-0.38□□□□□ -2.47
snR55snR55 MSB2P32334 1306 aa-0.38□□□□□ -2.47
snR55snR55 ATP6P00854 259 aa-0.39□□□□□ -2.47
snR55snR55 MSS116P15424 664 aaKnown RBP-0.39□□□□□ -2.47
snR55snR55 PEX3P28795 441 aa-0.39□□□□□ -2.47
snR55snR55 SWC5P38326 303 aa-0.39□□□□□ -2.47
snR55snR55 PRM9P39551 298 aa-0.39□□□□□ -2.47
snR55snR55 YIL001WP40560 513 aa-0.39□□□□□ -2.47
snR55snR55 TOS8P53147 276 aa-0.39□□□□□ -2.47
snR55snR55 PML1Q07930 204 aaPredicted RBP-0.39□□□□□ -2.47
snR55snR55 YPL162CQ12042 273 aa-0.39□□□□□ -2.47
snR55snR55 PAA1Q12447 191 aaKnown RBP-0.39□□□□□ -2.47
snR55snR55 RSR1P13856 272 aa-0.4□□□□□ -2.47
snR55snR55 PET9P18239 318 aaKnown RBP-0.4□□□□□ -2.47
snR55snR55 PBN1P25580 416 aa-0.4□□□□□ -2.47
snR55snR55 COS8P38723 381 aa-0.4□□□□□ -2.47
snR55snR55 RIO2P40160 425 aaKnown RBP-0.4□□□□□ -2.47
snR55snR55 GTO1P48239 356 aa-0.4□□□□□ -2.47
snR55snR55 YNL050CP53952 270 aa-0.4□□□□□ -2.47
snR55snR55 YMR279CQ03263 540 aa-0.4□□□□□ -2.47
snR55snR55 VPS20Q04272 221 aa-0.4□□□□□ -2.47
snR55snR55 YIA6P40556 373 aa-0.41□□□□□ -2.48
snR55snR55 COX16P47081 118 aa-0.41□□□□□ -2.48
snR55snR55 YGL185CP53100 379 aa-0.41□□□□□ -2.48
snR55snR55 PEX31P53203 462 aa-0.41□□□□□ -2.48
snR55snR55 SLX9P53251 210 aaPredicted RBP-0.41□□□□□ -2.48
snR55snR55 SEC10Q06245 871 aa-0.41□□□□□ -2.48
snR55snR55 SIR4P11978 1358 aa-0.42□□□□□ -2.48
snR55snR55 RPL4AP10664 362 aaKnown RBP-0.42□□□□□ -2.48
snR55snR55 POT1P27796 417 aaKnown RBP RIP-Chip data-0.42□□□□□ -2.48not detected
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms