RNA–Protein interactions for RNA: YPR065W

ROX1, Transcript of Heme-dependent repressor of hypoxic genes, yeastyeast

Gene ROX1, Length 1,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROX1YPR065W NBP35P52920 328 aa1.51□□□□□ -2.17
ROX1YPR065W SYF2P53277 215 aaPredicted RBP1.51□□□□□ -2.17
ROX1YPR065W MAL12P53341 584 aa1.51□□□□□ -2.17
ROX1YPR065W ASI3P53983 676 aa1.51□□□□□ -2.17
ROX1YPR065W RRN5Q02983 363 aa1.51□□□□□ -2.17
ROX1YPR065W YMR166CQ03829 368 aa1.51□□□□□ -2.17
ROX1YPR065W YLR173WQ06247 608 aa1.51□□□□□ -2.17
ROX1YPR065W MED4Q12343 284 aa1.51□□□□□ -2.17
ROX1YPR065W PST1Q12355 444 aa1.51□□□□□ -2.17
ROX1YPR065W MSF1P08425 469 aa1.5□□□□□ -2.17
ROX1YPR065W DPB2P24482 689 aaPredicted RBP1.5□□□□□ -2.17
ROX1YPR065W RSA4P25382 515 aaKnown RBP1.5□□□□□ -2.17
ROX1YPR065W MIG1P27705 504 aa1.5□□□□□ -2.17
ROX1YPR065W SFC1P33303 322 aa1.5□□□□□ -2.17
ROX1YPR065W COY1P34237 679 aa1.5□□□□□ -2.17
ROX1YPR065W SSH1P38353 490 aaKnown RBP1.5□□□□□ -2.17
ROX1YPR065W YHL049CP38722 271 aa1.5□□□□□ -2.17
ROX1YPR065W BIG1P38813 335 aa1.5□□□□□ -2.17
ROX1YPR065W SPT8P38915 602 aa1.5□□□□□ -2.17
ROX1YPR065W YER188WP40103 239 aa1.5□□□□□ -2.17
ROX1YPR065W YAR1P46683 200 aa1.5□□□□□ -2.17
ROX1YPR065W MRPL50P53724 139 aa1.5□□□□□ -2.17
ROX1YPR065W AAH1P53909 347 aa1.5□□□□□ -2.17
ROX1YPR065W YNL134CP53912 376 aaKnown RBP1.5□□□□□ -2.17
ROX1YPR065W SWS2P53937 143 aa1.5□□□□□ -2.17
ROX1YPR065W DIA1P54005 336 aa1.5□□□□□ -2.17
ROX1YPR065W LOA1Q06508 300 aa1.5□□□□□ -2.17
ROX1YPR065W YPR147CQ06522 304 aaKnown RBP1.5□□□□□ -2.17
ROX1YPR065W PLB3Q08108 686 aa1.5□□□□□ -2.17
ROX1YPR065W FEX1Q08913 375 aa1.5□□□□□ -2.17
ROX1YPR065W FEX2Q08991 375 aa1.5□□□□□ -2.17
ROX1YPR065W ZWF1P11412 505 aaKnown RBP1.49□□□□□ -2.17
ROX1YPR065W KRE1P17260 313 aa1.49□□□□□ -2.17
ROX1YPR065W RNA15P25299 296 aaPredicted RBP1.49□□□□□ -2.17
ROX1YPR065W CWP1P28319 239 aa1.49□□□□□ -2.17
ROX1YPR065W RNP1P32385 249 aa1.49□□□□□ -2.17
ROX1YPR065W SGE1P33335 543 aa1.49□□□□□ -2.17
ROX1YPR065W JEN1P36035 616 aa1.49□□□□□ -2.17
ROX1YPR065W PRS4P38063 326 aaPredicted RBP1.49□□□□□ -2.17
ROX1YPR065W YHR045WP38775 560 aa1.49□□□□□ -2.17
ROX1YPR065W TEM1P38987 245 aa1.49□□□□□ -2.17
ROX1YPR065W YER084WP40057 128 aa1.49□□□□□ -2.17
ROX1YPR065W DSN1P40568 576 aa1.49□□□□□ -2.17
ROX1YPR065W YJL028WP47062 111 aa1.49□□□□□ -2.17
ROX1YPR065W YPR098CQ06089 161 aa1.49□□□□□ -2.17
ROX1YPR065W BOP2Q06150 570 aa1.49□□□□□ -2.17
ROX1YPR065W ATG17Q06410 417 aa1.49□□□□□ -2.17
ROX1YPR065W SDO1Q07953 250 aaKnown RBP1.49□□□□□ -2.17
ROX1YPR065W RRS1Q08746 203 aaKnown RBP1.49□□□□□ -2.17
ROX1YPR065W YOR029WQ12243 111 aa1.49□□□□□ -2.17
ROX1YPR065W YBL008W-AQ3E821 79 aa1.49□□□□□ -2.17
ROX1YPR065W HIS3P06633 220 aa1.48□□□□□ -2.17
ROX1YPR065W MRPL39P36533 70 aa1.48□□□□□ -2.17
ROX1YPR065W FZO1P38297 855 aa1.48□□□□□ -2.17
ROX1YPR065W AGX1P43567 385 aa1.48□□□□□ -2.17
ROX1YPR065W OST3P48439 350 aa1.48□□□□□ -2.17
ROX1YPR065W USE1P53146 245 aa1.48□□□□□ -2.17
ROX1YPR065W RHO3Q00245 231 aaKnown RBP1.48□□□□□ -2.17
ROX1YPR065W PAM18Q07914 168 aa1.48□□□□□ -2.17
ROX1YPR065W HRT1Q08273 121 aa1.48□□□□□ -2.17
ROX1YPR065W YPR011CQ12251 326 aa1.48□□□□□ -2.17
ROX1YPR065W SMT3Q12306 101 aaKnown RBP1.48□□□□□ -2.17
ROX1YPR065W SNU23Q12368 194 aaPredicted RBP1.48□□□□□ -2.17
ROX1YPR065W YBL112CQ3E7Y4 105 aa1.48□□□□□ -2.17
ROX1YPR065W RAD10P06838 210 aa1.47□□□□□ -2.17
ROX1YPR065W SRB4P32569 687 aa1.47□□□□□ -2.17
ROX1YPR065W UTR5P32630 166 aa1.47□□□□□ -2.17
ROX1YPR065W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
ROX1YPR065W SDH4P37298 181 aa1.47□□□□□ -2.17
ROX1YPR065W YGP1P38616 354 aaKnown RBP1.47□□□□□ -2.17
ROX1YPR065W SMB1P40018 196 aaKnown RBP1.47□□□□□ -2.17
ROX1YPR065W LIA1P47120 325 aaKnown RBP1.47□□□□□ -2.17
ROX1YPR065W YJR141WP47172 347 aaPredicted RBP1.47□□□□□ -2.17
ROX1YPR065W SSU72P53538 206 aaPredicted RBP1.47□□□□□ -2.17
ROX1YPR065W PET117Q02771 107 aa1.47□□□□□ -2.17
ROX1YPR065W GOT1Q03554 138 aa1.47□□□□□ -2.17
ROX1YPR065W MIX17Q03667 156 aa1.47□□□□□ -2.17
ROX1YPR065W YDR124WQ04608 324 aa1.47□□□□□ -2.17
ROX1YPR065W CDD1Q06549 142 aa1.47□□□□□ -2.17
ROX1YPR065W RRP40Q08285 240 aaKnown RBP1.47□□□□□ -2.17
ROX1YPR065W CLP1Q08685 445 aaPredicted RBP1.47□□□□□ -2.17
ROX1YPR065W MSH5Q12175 901 aa1.47□□□□□ -2.17
ROX1YPR065W TDH2P00358 332 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W YKR104WP0CE69 306 aa1.46□□□□□ -2.18
ROX1YPR065W TOM40P23644 387 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W RPT5P33297 434 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W MRX3P38172 270 aa1.46□□□□□ -2.18
ROX1YPR065W SNZ3P43545 298 aa1.46□□□□□ -2.18
ROX1YPR065W GON7P46984 123 aa1.46□□□□□ -2.18
ROX1YPR065W PIR5P46999 287 aa1.46□□□□□ -2.18
ROX1YPR065W DSK2P48510 373 aa1.46□□□□□ -2.18
ROX1YPR065W EMI1Q04406 187 aa1.46□□□□□ -2.18
ROX1YPR065W GRH1Q04410 372 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W YMR114CQ04471 368 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W YLR179CQ06252 201 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W RDS3Q06835 107 aaPredicted RBP1.46□□□□□ -2.18
ROX1YPR065W SNF8Q12483 233 aa1.46□□□□□ -2.18
ROX1YPR065W YPL247CQ12523 523 aa1.46□□□□□ -2.18
ROX1YPR065W CFT1Q06632 1357 aaKnown RBP1.46□□□□□ -2.18
ROX1YPR065W YCR016WP25617 290 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 41.7 ms