RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C RGM1Q00453 211 aa2.17□□□□□ -2.06
CUP9YPL177C CDD1Q06549 142 aa2.17□□□□□ -2.06
CUP9YPL177C SME1Q12330 94 aaPredicted RBP2.17□□□□□ -2.06
CUP9YPL177C NOT5Q12514 560 aaPredicted RBP2.17□□□□□ -2.06
CUP9YPL177C STH1P32597 1359 aa2.17□□□□□ -2.06
CUP9YPL177C RPL24AP04449 155 aaKnown RBP2.16□□□□□ -2.06
CUP9YPL177C BMH1P29311 267 aaKnown RBP2.16□□□□□ -2.06
CUP9YPL177C PRM9P39551 298 aa2.16□□□□□ -2.06
CUP9YPL177C DDI1P40087 428 aa2.16□□□□□ -2.06
CUP9YPL177C YJR012CP47087 207 aa2.16□□□□□ -2.06
CUP9YPL177C EBS1Q03466 884 aaKnown RBP2.16□□□□□ -2.06
CUP9YPL177C YOR268CQ08734 132 aa2.16□□□□□ -2.06
CUP9YPL177C YPL247CQ12523 523 aa2.16□□□□□ -2.06
CUP9YPL177C POL30P15873 258 aaKnown RBP2.15□□□□□ -2.07
CUP9YPL177C DPB2P24482 689 aaPredicted RBP2.15□□□□□ -2.07
CUP9YPL177C GON7P46984 123 aa2.15□□□□□ -2.07
CUP9YPL177C YJR141WP47172 347 aaPredicted RBP2.15□□□□□ -2.07
CUP9YPL177C SLX9P53251 210 aaPredicted RBP2.15□□□□□ -2.07
CUP9YPL177C MPP6P53725 186 aaPredicted RBP2.15□□□□□ -2.07
CUP9YPL177C GRH1Q04410 372 aaKnown RBP2.15□□□□□ -2.07
CUP9YPL177C PEX10Q05568 337 aa2.15□□□□□ -2.07
CUP9YPL177C PLB3Q08108 686 aa2.15□□□□□ -2.07
CUP9YPL177C YPL119C-AQ3E751 87 aa2.15□□□□□ -2.07
CUP9YPL177C QRI5P32344 111 aa2.14□□□□□ -2.07
CUP9YPL177C SFC1P33303 322 aa2.14□□□□□ -2.07
CUP9YPL177C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
CUP9YPL177C YHR045WP38775 560 aa2.14□□□□□ -2.07
CUP9YPL177C AGX1P43567 385 aa2.14□□□□□ -2.07
CUP9YPL177C YJR146WP47174 117 aa2.14□□□□□ -2.07
CUP9YPL177C MDM34P53083 459 aa2.14□□□□□ -2.07
CUP9YPL177C AAH1P53909 347 aa2.14□□□□□ -2.07
CUP9YPL177C ALG11P53954 548 aaKnown RBP2.14□□□□□ -2.07
CUP9YPL177C EMI1Q04406 187 aa2.14□□□□□ -2.07
CUP9YPL177C MRP1P10662 321 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C DPM1P14020 267 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C GDH2P33327 1092 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C MAL32P38158 584 aa2.13□□□□□ -2.07
CUP9YPL177C PET100P38958 111 aa2.13□□□□□ -2.07
CUP9YPL177C RPL10P41805 221 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C YAR1P46683 200 aa2.13□□□□□ -2.07
CUP9YPL177C DSK2P48510 373 aa2.13□□□□□ -2.07
CUP9YPL177C MAL12P53341 584 aa2.13□□□□□ -2.07
CUP9YPL177C YMR114CQ04471 368 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C KAP95Q06142 861 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C BOP2Q06150 570 aa2.13□□□□□ -2.07
CUP9YPL177C SMT3Q12306 101 aaKnown RBP2.13□□□□□ -2.07
CUP9YPL177C GEP5Q12393 293 aa2.13□□□□□ -2.07
CUP9YPL177C SNF6P18888 332 aa2.12□□□□□ -2.07
CUP9YPL177C PRS2P38620 318 aaKnown RBP2.12□□□□□ -2.07
CUP9YPL177C TEM1P38987 245 aa2.12□□□□□ -2.07
CUP9YPL177C DSN1P40568 576 aa2.12□□□□□ -2.07
CUP9YPL177C VPS68Q12016 184 aa2.12□□□□□ -2.07
CUP9YPL177C YOL107WQ12239 342 aa2.12□□□□□ -2.07
CUP9YPL177C YPR011CQ12251 326 aa2.12□□□□□ -2.07
CUP9YPL177C PST1Q12355 444 aa2.12□□□□□ -2.07
CUP9YPL177C RPL26AP05743 127 aaKnown RBP2.11□□□□□ -2.07
CUP9YPL177C PPH21P23594 369 aa2.11□□□□□ -2.07
CUP9YPL177C RNP1P32385 249 aa2.11□□□□□ -2.07
CUP9YPL177C BIG1P38813 335 aa2.11□□□□□ -2.07
CUP9YPL177C YGL034CP53186 121 aa2.11□□□□□ -2.07
CUP9YPL177C RPL26BP53221 127 aaKnown RBP2.11□□□□□ -2.07
CUP9YPL177C CAB4P53332 305 aa2.11□□□□□ -2.07
CUP9YPL177C ADH6Q04894 360 aaKnown RBP2.11□□□□□ -2.07
CUP9YPL177C SUE1Q06524 206 aa2.11□□□□□ -2.07
CUP9YPL177C SLD7Q08457 257 aa2.11□□□□□ -2.07
CUP9YPL177C BTS1Q12051 335 aa2.11□□□□□ -2.07
CUP9YPL177C POX1P13711 748 aa2.1□□□□□ -2.07
CUP9YPL177C DAL82P21705 255 aa2.1□□□□□ -2.07
CUP9YPL177C RPT5P33297 434 aaKnown RBP2.1□□□□□ -2.07
CUP9YPL177C JEN1P36035 616 aa2.1□□□□□ -2.07
CUP9YPL177C ECM13P38195 257 aa2.1□□□□□ -2.07
CUP9YPL177C SPT8P38915 602 aa2.1□□□□□ -2.07
CUP9YPL177C SMB1P40018 196 aaKnown RBP2.1□□□□□ -2.07
CUP9YPL177C MYO5Q04439 1219 aaKnown RBP2.1□□□□□ -2.07
CUP9YPL177C YLR179CQ06252 201 aaKnown RBP2.1□□□□□ -2.07
CUP9YPL177C YBL008W-AQ3E821 79 aa2.1□□□□□ -2.07
CUP9YPL177C VPS3P23643 1011 aa2.09□□□□□ -2.07
CUP9YPL177C CWP1P28319 239 aa2.09□□□□□ -2.07
CUP9YPL177C EHD3P28817 500 aa2.09□□□□□ -2.07
CUP9YPL177C CLB6P32943 380 aa2.09□□□□□ -2.07
CUP9YPL177C SLM2P53955 656 aa2.09□□□□□ -2.07
CUP9YPL177C SPO77Q06134 477 aa2.09□□□□□ -2.07
CUP9YPL177C RRT8Q08219 342 aa2.09□□□□□ -2.07
CUP9YPL177C INO80P53115 1489 aa2.08□□□□□ -2.08
CUP9YPL177C MSF1P08425 469 aa2.08□□□□□ -2.08
CUP9YPL177C YUH1P35127 236 aa2.08□□□□□ -2.08
CUP9YPL177C COG3P40094 801 aa2.08□□□□□ -2.08
CUP9YPL177C CTF19Q02732 369 aa2.08□□□□□ -2.08
CUP9YPL177C YDR209CQ03480 137 aa2.08□□□□□ -2.08
CUP9YPL177C SDO1Q07953 250 aaKnown RBP2.08□□□□□ -2.08
CUP9YPL177C RSR1P13856 272 aa2.07□□□□□ -2.08
CUP9YPL177C YBR096WP38256 230 aa2.07□□□□□ -2.08
CUP9YPL177C SNZ3P43545 298 aa2.07□□□□□ -2.08
CUP9YPL177C MNN5P46982 586 aa2.07□□□□□ -2.08
CUP9YPL177C GLG2P47011 380 aa2.07□□□□□ -2.08
CUP9YPL177C YJL016WP47072 561 aa2.07□□□□□ -2.08
CUP9YPL177C RSM10Q03201 203 aa2.07□□□□□ -2.08
CUP9YPL177C YPR147CQ06522 304 aaKnown RBP2.07□□□□□ -2.08
CUP9YPL177C YOR029WQ12243 111 aa2.07□□□□□ -2.08
CUP9YPL177C SNF8Q12483 233 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 101.2 ms