RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C APE4P38821 490 aa0.58□□□□□ -2.32
VPS20YMR077C NPT1P39683 429 aaKnown RBP0.58□□□□□ -2.32
VPS20YMR077C SSO2P39926 295 aa0.58□□□□□ -2.32
VPS20YMR077C AVT2P39981 480 aa0.58□□□□□ -2.32
VPS20YMR077C PEX31P53203 462 aa0.58□□□□□ -2.32
VPS20YMR077C EMI1Q04406 187 aa0.58□□□□□ -2.32
VPS20YMR077C BOP2Q06150 570 aa0.58□□□□□ -2.32
VPS20YMR077C MEU1Q07938 337 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
VPS20YMR077C RIO1Q12196 484 aaKnown RBP0.58□□□□□ -2.32
VPS20YMR077C YAL064W-BO13512 126 aa0.57□□□□□ -2.32
VPS20YMR077C ILV1P00927 576 aaKnown RBP0.57□□□□□ -2.32
VPS20YMR077C COS2P0CX12 379 aa0.57□□□□□ -2.32
VPS20YMR077C COS3P0CX13 379 aa0.57□□□□□ -2.32
VPS20YMR077C KDX1P36005 433 aa0.57□□□□□ -2.32
VPS20YMR077C TDA11P38854 504 aa0.57□□□□□ -2.32
VPS20YMR077C OST2P46964 130 aa0.57□□□□□ -2.32
VPS20YMR077C GTO1P48239 356 aa0.57□□□□□ -2.32
VPS20YMR077C MRPS8Q03799 155 aa0.57□□□□□ -2.32
VPS20YMR077C SLD7Q08457 257 aa0.57□□□□□ -2.32
VPS20YMR077C GPI12P23797 304 aa0.56□□□□□ -2.32
VPS20YMR077C PET18P25362 215 aa0.56□□□□□ -2.32
VPS20YMR077C ICL1P28240 557 aaPredicted RBP0.56□□□□□ -2.32
VPS20YMR077C PEX3P28795 441 aa0.56□□□□□ -2.32
VPS20YMR077C ECM13P38195 257 aa0.56□□□□□ -2.32
VPS20YMR077C SER33P40510 469 aa0.56□□□□□ -2.32
VPS20YMR077C CDC40P40968 455 aaPredicted RBP0.56□□□□□ -2.32
VPS20YMR077C AGP3P43548 558 aa0.56□□□□□ -2.32
VPS20YMR077C RPL37AP49166 88 aaKnown RBP0.56□□□□□ -2.32
VPS20YMR077C VOA1P53262 265 aa0.56□□□□□ -2.32
VPS20YMR077C BUD25P85052 153 aa0.56□□□□□ -2.32
VPS20YMR077C CYT2Q00873 224 aa0.56□□□□□ -2.32
VPS20YMR077C RSM10Q03201 203 aa0.56□□□□□ -2.32
VPS20YMR077C ABZ2Q03266 374 aa0.56□□□□□ -2.32
VPS20YMR077C VPS20Q04272 221 aa0.56□□□□□ -2.32
VPS20YMR077C SPT7P35177 1332 aa0.56□□□□□ -2.32
VPS20YMR077C HEK2P38199 381 aaKnown RBP RIP-Chip data0.55□□□□□ -2.32not detected
VPS20YMR077C RPL13BP40212 199 aaKnown RBP0.55□□□□□ -2.32
VPS20YMR077C LOH1P47055 219 aa0.55□□□□□ -2.32
VPS20YMR077C KEL2P50090 882 aa0.55□□□□□ -2.32
VPS20YMR077C ATC1Q04005 294 aa0.55□□□□□ -2.32
VPS20YMR077C SEC10Q06245 871 aa0.55□□□□□ -2.32
VPS20YMR077C GPN3Q06543 272 aa0.55□□□□□ -2.32
VPS20YMR077C VAC14Q06708 880 aa0.55□□□□□ -2.32
VPS20YMR077C RPL13AQ12690 199 aaPredicted RBP0.55□□□□□ -2.32
VPS20YMR077C YOS9Q99220 542 aa0.55□□□□□ -2.32
VPS20YMR077C AI5_BETAQ9ZZX0 354 aa0.55□□□□□ -2.32
VPS20YMR077C VAR1P02381 398 aa0.54□□□□□ -2.32
VPS20YMR077C YHR032W-AP0C5N6 59 aa0.54□□□□□ -2.32
VPS20YMR077C CWP1P28319 239 aa0.54□□□□□ -2.32
VPS20YMR077C YHR022CP38763 256 aa0.54□□□□□ -2.32
VPS20YMR077C SLX9P53251 210 aaPredicted RBP0.54□□□□□ -2.32
VPS20YMR077C PEX10Q05568 337 aa0.54□□□□□ -2.32
VPS20YMR077C RRG8Q06109 277 aa0.54□□□□□ -2.32
VPS20YMR077C BER1Q06688 274 aaKnown RBP0.54□□□□□ -2.32
VPS20YMR077C CSM1P25651 190 aa0.53□□□□□ -2.32
VPS20YMR077C RPC25P35718 212 aa0.53□□□□□ -2.32
VPS20YMR077C PHO88P38264 188 aaPredicted RBP0.53□□□□□ -2.32
VPS20YMR077C YHL049CP38722 271 aa0.53□□□□□ -2.32
VPS20YMR077C SMD3P43321 101 aaKnown RBP0.53□□□□□ -2.32
VPS20YMR077C SFH1Q06168 426 aa0.53□□□□□ -2.32
VPS20YMR077C YPR011CQ12251 326 aa0.53□□□□□ -2.32
VPS20YMR077C DDI2P0CH63 225 aa0.52□□□□□ -2.33
VPS20YMR077C DDI3P0CH64 225 aa0.52□□□□□ -2.33
VPS20YMR077C RPL4AP10664 362 aaKnown RBP0.52□□□□□ -2.33
VPS20YMR077C SAR1P20606 190 aaKnown RBP0.52□□□□□ -2.33
VPS20YMR077C SEC22P22214 214 aa0.52□□□□□ -2.33
VPS20YMR077C MDH3P32419 343 aaKnown RBP RIP-Chip data0.52□□□□□ -2.33not detected
VPS20YMR077C SWI3P32591 825 aa0.52□□□□□ -2.33
VPS20YMR077C UPS2P35200 230 aa0.52□□□□□ -2.33
VPS20YMR077C HIS2P38635 335 aa0.52□□□□□ -2.33
VPS20YMR077C PRM9P39551 298 aa0.52□□□□□ -2.33
VPS20YMR077C RPL4BP49626 362 aaKnown RBP0.52□□□□□ -2.33
VPS20YMR077C CPD1P53314 239 aa0.52□□□□□ -2.33
VPS20YMR077C YNR062CP53748 327 aa0.52□□□□□ -2.33
VPS20YMR077C VBA1Q04301 562 aa0.52□□□□□ -2.33
VPS20YMR077C YLR162WQ06235 118 aa0.52□□□□□ -2.33
VPS20YMR077C ATO3Q12359 275 aa0.52□□□□□ -2.33
VPS20YMR077C BBP1Q12365 385 aa0.52□□□□□ -2.33
VPS20YMR077C FKS1P38631 1876 aaKnown RBP0.52□□□□□ -2.33
VPS20YMR077C CPA1P07258 411 aaKnown RBP0.51□□□□□ -2.33
VPS20YMR077C TCD1P38756 429 aa0.51□□□□□ -2.33
VPS20YMR077C RPL37BP51402 88 aaKnown RBP0.51□□□□□ -2.33
VPS20YMR077C YNL050CP53952 270 aa0.51□□□□□ -2.33
VPS20YMR077C YDR286CQ05530 114 aa0.51□□□□□ -2.33
VPS20YMR077C CUR1Q06469 252 aa0.51□□□□□ -2.33
VPS20YMR077C RPP0P05317 312 aaKnown RBP0.5□□□□□ -2.33
VPS20YMR077C UGA1P17649 471 aa0.5□□□□□ -2.33
VPS20YMR077C RCN1P36054 211 aa0.5□□□□□ -2.33
VPS20YMR077C PRS4P38063 326 aaPredicted RBP0.5□□□□□ -2.33
VPS20YMR077C ARC15P40518 154 aaRIP-Chip data0.5□□□□□ -2.33not detected
VPS20YMR077C NBP35P52920 328 aa0.5□□□□□ -2.33
VPS20YMR077C SWS2P53937 143 aa0.5□□□□□ -2.33
VPS20YMR077C YLR179CQ06252 201 aaKnown RBP0.5□□□□□ -2.33
VPS20YMR077C PER33Q12144 273 aa0.5□□□□□ -2.33
VPS20YMR077C STH1P32597 1359 aa0.49□□□□□ -2.33
VPS20YMR077C RPC40P07703 335 aaKnown RBP0.49□□□□□ -2.33
VPS20YMR077C GCD2P12754 651 aaPredicted RBP0.49□□□□□ -2.33
VPS20YMR077C POF1P25576 258 aa0.49□□□□□ -2.33
VPS20YMR077C YJR079WP47126 109 aa0.49□□□□□ -2.33
VPS20YMR077C TIM21P53220 239 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms