RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W ATC1Q04005 294 aa1.43□□□□□ -2.18
SEC22YLR268W SMT3Q12306 101 aaKnown RBP1.43□□□□□ -2.18
SEC22YLR268W YBL112CQ3E7Y4 105 aa1.43□□□□□ -2.18
SEC22YLR268W POL30P15873 258 aaKnown RBP1.42□□□□□ -2.18
SEC22YLR268W DPB2P24482 689 aaPredicted RBP1.42□□□□□ -2.18
SEC22YLR268W SFC1P33303 322 aa1.42□□□□□ -2.18
SEC22YLR268W COY1P34237 679 aa1.42□□□□□ -2.18
SEC22YLR268W PRS2P38620 318 aaKnown RBP1.42□□□□□ -2.18
SEC22YLR268W SPT8P38915 602 aa1.42□□□□□ -2.18
SEC22YLR268W TEM1P38987 245 aa1.42□□□□□ -2.18
SEC22YLR268W PRM9P39551 298 aa1.42□□□□□ -2.18
SEC22YLR268W DSN1P40568 576 aa1.42□□□□□ -2.18
SEC22YLR268W YJL028WP47062 111 aa1.42□□□□□ -2.18
SEC22YLR268W NBP1P52919 319 aaPredicted RBP1.42□□□□□ -2.18
SEC22YLR268W SSU72P53538 206 aaPredicted RBP1.42□□□□□ -2.18
SEC22YLR268W EBS1Q03466 884 aaKnown RBP1.42□□□□□ -2.18
SEC22YLR268W FCF1Q05498 189 aaPredicted RBP1.42□□□□□ -2.18
SEC22YLR268W AGC1Q12482 902 aa1.42□□□□□ -2.18
SEC22YLR268W RAD3P06839 778 aa1.41□□□□□ -2.18
SEC22YLR268W COS2P0CX12 379 aa1.41□□□□□ -2.18
SEC22YLR268W COS3P0CX13 379 aa1.41□□□□□ -2.18
SEC22YLR268W RSR1P13856 272 aa1.41□□□□□ -2.18
SEC22YLR268W DAL82P21705 255 aa1.41□□□□□ -2.18
SEC22YLR268W TOM40P23644 387 aaKnown RBP1.41□□□□□ -2.18
SEC22YLR268W YUH1P35127 236 aa1.41□□□□□ -2.18
SEC22YLR268W YER188WP40103 239 aa1.41□□□□□ -2.18
SEC22YLR268W RPL10P41805 221 aaKnown RBP1.41□□□□□ -2.18
SEC22YLR268W AGX1P43567 385 aa1.41□□□□□ -2.18
SEC22YLR268W YJR141WP47172 347 aaPredicted RBP1.41□□□□□ -2.18
SEC22YLR268W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
SEC22YLR268W YDR209CQ03480 137 aa1.41□□□□□ -2.18
SEC22YLR268W MIX17Q03667 156 aa1.41□□□□□ -2.18
SEC22YLR268W CTS2Q06350 511 aa1.41□□□□□ -2.18
SEC22YLR268W RRT8Q08219 342 aa1.41□□□□□ -2.18
SEC22YLR268W SLD7Q08457 257 aa1.41□□□□□ -2.18
SEC22YLR268W BTS1Q12051 335 aa1.41□□□□□ -2.18
SEC22YLR268W SNF8Q12483 233 aa1.41□□□□□ -2.18
SEC22YLR268W YPL247CQ12523 523 aa1.41□□□□□ -2.18
SEC22YLR268W YPL119C-AQ3E751 87 aa1.41□□□□□ -2.18
SEC22YLR268W RAD10P06838 210 aa1.4□□□□□ -2.19
SEC22YLR268W POX1P13711 748 aa1.4□□□□□ -2.19
SEC22YLR268W VPS3P23643 1011 aa1.4□□□□□ -2.19
SEC22YLR268W CWP1P28319 239 aa1.4□□□□□ -2.19
SEC22YLR268W QRI5P32344 111 aa1.4□□□□□ -2.19
SEC22YLR268W RNP1P32385 249 aa1.4□□□□□ -2.19
SEC22YLR268W MAL32P38158 584 aa1.4□□□□□ -2.19
SEC22YLR268W YHR045WP38775 560 aa1.4□□□□□ -2.19
SEC22YLR268W PIR5P46999 287 aa1.4□□□□□ -2.19
SEC22YLR268W MAL12P53341 584 aa1.4□□□□□ -2.19
SEC22YLR268W EMI1Q04406 187 aa1.4□□□□□ -2.19
SEC22YLR268W YMR114CQ04471 368 aaKnown RBP1.4□□□□□ -2.19
SEC22YLR268W BOP2Q06150 570 aa1.4□□□□□ -2.19
SEC22YLR268W ATG17Q06410 417 aa1.4□□□□□ -2.19
SEC22YLR268W CDD1Q06549 142 aa1.4□□□□□ -2.19
SEC22YLR268W PLB3Q08108 686 aa1.4□□□□□ -2.19
SEC22YLR268W YOL107WQ12239 342 aa1.4□□□□□ -2.19
SEC22YLR268W PST1Q12355 444 aa1.4□□□□□ -2.19
SEC22YLR268W MSF1P08425 469 aa1.39□□□□□ -2.19
SEC22YLR268W PPH21P23594 369 aa1.39□□□□□ -2.19
SEC22YLR268W RNA15P25299 296 aaPredicted RBP1.39□□□□□ -2.19
SEC22YLR268W GDH2P33327 1092 aaKnown RBP1.39□□□□□ -2.19
SEC22YLR268W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SEC22YLR268W DRE2P36152 348 aa1.39□□□□□ -2.19
SEC22YLR268W PRS4P38063 326 aaPredicted RBP1.39□□□□□ -2.19
SEC22YLR268W MRX3P38172 270 aa1.39□□□□□ -2.19
SEC22YLR268W ECM13P38195 257 aa1.39□□□□□ -2.19
SEC22YLR268W ASI3P53983 676 aa1.39□□□□□ -2.19
SEC22YLR268W YPR098CQ06089 161 aa1.39□□□□□ -2.19
SEC22YLR268W YPR147CQ06522 304 aaKnown RBP1.39□□□□□ -2.19
SEC22YLR268W YOR268CQ08734 132 aa1.39□□□□□ -2.19
SEC22YLR268W NOT5Q12514 560 aaPredicted RBP1.39□□□□□ -2.19
SEC22YLR268W YBL008W-AQ3E821 79 aa1.39□□□□□ -2.19
SEC22YLR268W RPL26AP05743 127 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W DPM1P14020 267 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W SEC22P22214 214 aa1.38□□□□□ -2.19
SEC22YLR268W RPT5P33297 434 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W MED6P38782 295 aa1.38□□□□□ -2.19
SEC22YLR268W BIG1P38813 335 aa1.38□□□□□ -2.19
SEC22YLR268W SMB1P40018 196 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W BNA6P43619 295 aa1.38□□□□□ -2.19
SEC22YLR268W GON7P46984 123 aa1.38□□□□□ -2.19
SEC22YLR268W YJL016WP47072 561 aa1.38□□□□□ -2.19
SEC22YLR268W DSK2P48510 373 aa1.38□□□□□ -2.19
SEC22YLR268W MDM34P53083 459 aa1.38□□□□□ -2.19
SEC22YLR268W USE1P53146 245 aa1.38□□□□□ -2.19
SEC22YLR268W RPL26BP53221 127 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W RGM1Q00453 211 aa1.38□□□□□ -2.19
SEC22YLR268W GRH1Q04410 372 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W MYO5Q04439 1219 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W YDR124WQ04608 324 aa1.38□□□□□ -2.19
SEC22YLR268W YLR173WQ06247 608 aa1.38□□□□□ -2.19
SEC22YLR268W SDO1Q07953 250 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W RRP40Q08285 240 aaKnown RBP1.38□□□□□ -2.19
SEC22YLR268W YPR011CQ12251 326 aa1.38□□□□□ -2.19
SEC22YLR268W GEP5Q12393 293 aa1.38□□□□□ -2.19
SEC22YLR268W YKR104WP0CE69 306 aa1.37□□□□□ -2.19
SEC22YLR268W HOM6P31116 359 aaKnown RBP1.37□□□□□ -2.19
SEC22YLR268W JEN1P36035 616 aa1.37□□□□□ -2.19
SEC22YLR268W FZO1P38297 855 aa1.37□□□□□ -2.19
SEC22YLR268W SSH1P38353 490 aaKnown RBP1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms