RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS34	YLR240W	YOR114W	Q12219	294 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	PCL9	Q12477	304 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	COX9	P07255	59 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	DST1	P07273	309 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	GCN3	P14741	305 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	SNF6	P18888	332 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	AHC2	P25649	128 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	ITR1	P30605	584 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	NTG1	P31378	399 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	VPS51	P36116	164 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	DED81	P38707	554 aa	Known RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	NVJ1	P38881	321 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	AST2	P39945	430 aa	Known RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	SER33	P40510	469 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	YJR011C	P47086	261 aa	Predicted RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	YAE1	P47118	141 aa	Predicted RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	JHD2	P47156	728 aa	Predicted RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	YGL235W	P53071	178 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	MPC1	P53157	130 aa	Known RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	YMR181C	Q03231	154 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	GPI17	Q04080	534 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	RRP45	Q05636	305 aa	Known RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	MRPL35	Q06678	367 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	YPR091C	Q06833	770 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	UIP4	Q08926	304 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	YGK3	Q12222	375 aa	Predicted RBP	1.7	□□□□□ -2.14
VPS34	YLR240W	TPO4	Q12256	659 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	YOS9	Q99220	542 aa		1.7	□□□□□ -2.14
VPS34	YLR240W	RPL6B	P05739	176 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	CAP2	P13517	287 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	CHA1	P25379	360 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	ITR2	P30606	609 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	CDC13	P32797	924 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	ECT1	P33412	323 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	MRPL15	P36523	253 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RIB5	P38145	238 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	TAE1	P38340	232 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	TRR2	P38816	342 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	PTH1	P38876	190 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	PRE5	P40302	234 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	PRM5	P40476	318 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	GDS1	P41913	522 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RPE1	P46969	238 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	LSM1	P47017	172 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	EMC4	P53073	190 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	TPN1	P53099	579 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	LSG1	P53145	640 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	MKC7	P53379	596 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	AQR1	P53943	586 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	NUP49	Q02199	472 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	PEX10	Q05568	337 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	SNT309	Q06091	175 aa	Predicted RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	BOP2	Q06150	570 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	GPN3	Q06543	272 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	IPK1	Q06667	281 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RRP40	Q08285	240 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	YDL211C	Q12121	372 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	SIA1	Q12212	622 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	VAM3	Q12241	283 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RBD2	Q12270	262 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RPS14A	P06367	137 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	NFT1	P0CE68	1218 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	STF2	P16965	84 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	PET9	P18239	318 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	PRE7	P23724	241 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	MKK1	P32490	508 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	YEL045C	P32616	141 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	SUI1	P32911	108 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	TAF14	P35189	244 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	MRPL4	P36517	319 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RPS20	P38701	121 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	MED6	P38782	295 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	FET3	P38993	636 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RPS14B	P39516	138 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	SOK1	P40317	901 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	ICE2	P40499	491 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	PAC11	P40960	533 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	STB1	P42845	420 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	WWM1	P43582	211 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	MTM1	P53320	366 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	YIF1	P53845	314 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	GIM3	P53900	129 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	YMR099C	Q03161	297 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	AIM36	Q03798	255 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	RNH202	Q05635	350 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	YPR127W	Q06494	345 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	YOR289W	Q12012	251 aa	Predicted RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	SLF1	Q12034	447 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	HSP42	Q12329	375 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	FRE6	Q12473	712 aa		1.69	□□□□□ -2.14
VPS34	YLR240W	PAR32	Q12515	295 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	MEX67	Q99257	599 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	DET1	Q99288	334 aa	Known RBP	1.69	□□□□□ -2.14
VPS34	YLR240W	SCEI	P03882	235 aa		1.68	□□□□□ -2.14
VPS34	YLR240W	PDE2	P06776	526 aa		1.68	□□□□□ -2.14
VPS34	YLR240W	HOM3	P10869	527 aa		1.68	□□□□□ -2.14
VPS34	YLR240W	LSB5	P25369	354 aa		1.68	□□□□□ -2.14
VPS34	YLR240W	RHB1	P25378	209 aa		1.68	□□□□□ -2.14
VPS34	YLR240W	MSN4	P33749	630 aa		1.68	□□□□□ -2.14
VPS34	YLR240W	GPX1	P36014	167 aa		1.68	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms