RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C RPL4BP49626 362 aaKnown RBP2.08□□□□□ -2.08
SMD3YLR147C NIF3P53081 288 aa2.08□□□□□ -2.08
SMD3YLR147C MDM34P53083 459 aa2.08□□□□□ -2.08
SMD3YLR147C ARV1Q06541 321 aa2.08□□□□□ -2.08
SMD3YLR147C YHL049CP38722 271 aa2.07□□□□□ -2.08
SMD3YLR147C SPT8P38915 602 aa2.07□□□□□ -2.08
SMD3YLR147C YJL028WP47062 111 aa2.07□□□□□ -2.08
SMD3YLR147C ARP5P53946 755 aa2.07□□□□□ -2.08
SMD3YLR147C GEP5Q12393 293 aa2.07□□□□□ -2.08
SMD3YLR147C FMP16Q12497 93 aa2.07□□□□□ -2.08
SMD3YLR147C YKL070WP36087 169 aa2.06□□□□□ -2.08
SMD3YLR147C TEM1P38987 245 aa2.06□□□□□ -2.08
SMD3YLR147C TIF34P40217 347 aaKnown RBP2.06□□□□□ -2.08
SMD3YLR147C YJL027CP47063 138 aaPredicted RBP2.06□□□□□ -2.08
SMD3YLR147C BAT2P47176 376 aaKnown RBP2.06□□□□□ -2.08
SMD3YLR147C MRPL23Q12487 163 aaPredicted RBP2.06□□□□□ -2.08
SMD3YLR147C DRE2P36152 348 aa2.05□□□□□ -2.08
SMD3YLR147C YHL026CP38740 315 aa2.05□□□□□ -2.08
SMD3YLR147C MNT4P53745 580 aa2.05□□□□□ -2.08
SMD3YLR147C YLR413WQ06689 675 aa2.05□□□□□ -2.08
SMD3YLR147C PER33Q12144 273 aa2.05□□□□□ -2.08
SMD3YLR147C EMC6Q12431 108 aa2.05□□□□□ -2.08
SMD3YLR147C HSM3P38348 480 aa2.04□□□□□ -2.08
SMD3YLR147C PRM9P39551 298 aa2.04□□□□□ -2.08
SMD3YLR147C INO80P53115 1489 aa2.04□□□□□ -2.08
SMD3YLR147C TIM21P53220 239 aa2.04□□□□□ -2.08
SMD3YLR147C EMI1Q04406 187 aa2.04□□□□□ -2.08
SMD3YLR147C BOP2Q06150 570 aa2.04□□□□□ -2.08
SMD3YLR147C YHR086W-AQ3E746 53 aa2.04□□□□□ -2.08
SMD3YLR147C RNP1P32385 249 aa2.03□□□□□ -2.08
SMD3YLR147C YOR062CP36025 268 aa2.03□□□□□ -2.08
SMD3YLR147C TAD2P47058 250 aa2.03□□□□□ -2.08
SMD3YLR147C SPP2Q02521 185 aa2.03□□□□□ -2.08
SMD3YLR147C PEX12Q04370 399 aa2.03□□□□□ -2.08
SMD3YLR147C YCR102CP25608 368 aa2.02□□□□□ -2.09
SMD3YLR147C MAL32P38158 584 aa2.02□□□□□ -2.09
SMD3YLR147C ECM13P38195 257 aa2.02□□□□□ -2.09
SMD3YLR147C MRX5P47007 382 aa2.02□□□□□ -2.09
SMD3YLR147C SLX9P53251 210 aaPredicted RBP2.02□□□□□ -2.09
SMD3YLR147C MAL12P53341 584 aa2.02□□□□□ -2.09
SMD3YLR147C AAH1P53909 347 aa2.02□□□□□ -2.09
SMD3YLR147C RSM10Q03201 203 aa2.02□□□□□ -2.09
SMD3YLR147C YIL002W-AQ3E7Z5 69 aa2.02□□□□□ -2.09
SMD3YLR147C POX1P13711 748 aa2.01□□□□□ -2.09
SMD3YLR147C HEK2P38199 381 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
SMD3YLR147C RRF1P38771 230 aa2.01□□□□□ -2.09
SMD3YLR147C SHC1P39000 512 aa2.01□□□□□ -2.09
SMD3YLR147C EGD1Q02642 157 aaKnown RBP2.01□□□□□ -2.09
SMD3YLR147C PST1Q12355 444 aa2.01□□□□□ -2.09
SMD3YLR147C ADH3P07246 375 aaKnown RBP2□□□□□ -2.09
SMD3YLR147C SCM4P32564 187 aa2□□□□□ -2.09
SMD3YLR147C ERV25P54837 211 aaKnown RBP2□□□□□ -2.09
SMD3YLR147C EBS1Q03466 884 aaKnown RBP2□□□□□ -2.09
SMD3YLR147C SME1Q12330 94 aaPredicted RBP2□□□□□ -2.09
SMD3YLR147C FKS1P38631 1876 aaKnown RBP2□□□□□ -2.09
SMD3YLR147C SGA1P08019 549 aa1.99□□□□□ -2.09
SMD3YLR147C MET16P18408 261 aaPredicted RBP1.99□□□□□ -2.09
SMD3YLR147C DAL80P26343 269 aa1.99□□□□□ -2.09
SMD3YLR147C GMC2Q06201 188 aa1.99□□□□□ -2.09
SMD3YLR147C CTR3Q06686 241 aa1.99□□□□□ -2.09
SMD3YLR147C STH1P32597 1359 aa1.98□□□□□ -2.09
SMD3YLR147C RAD3P06839 778 aa1.98□□□□□ -2.09
SMD3YLR147C PEX18P38855 283 aa1.98□□□□□ -2.09
SMD3YLR147C COA1P40452 197 aa1.98□□□□□ -2.09
SMD3YLR147C MAL13P53338 473 aa1.98□□□□□ -2.09
SMD3YLR147C SAS5Q99314 248 aa1.98□□□□□ -2.09
SMD3YLR147C SSA3P09435 649 aaKnown RBP1.97□□□□□ -2.09
SMD3YLR147C YJL118WP47022 219 aa1.97□□□□□ -2.09
SMD3YLR147C PEX10Q05568 337 aa1.97□□□□□ -2.09
SMD3YLR147C EMP46Q12396 444 aa1.97□□□□□ -2.09
SMD3YLR147C CCA1P21269 546 aa1.96□□□□□ -2.1
SMD3YLR147C CWP1P28319 239 aa1.96□□□□□ -2.1
SMD3YLR147C DOA4P32571 926 aa1.96□□□□□ -2.1
SMD3YLR147C RCY1P39531 840 aa1.96□□□□□ -2.1
SMD3YLR147C OST2P46964 130 aa1.96□□□□□ -2.1
SMD3YLR147C SNX4P47057 423 aa1.96□□□□□ -2.1
SMD3YLR147C YGL034CP53186 121 aa1.96□□□□□ -2.1
SMD3YLR147C SLD7Q08457 257 aa1.96□□□□□ -2.1
SMD3YLR147C YPR011CQ12251 326 aa1.96□□□□□ -2.1
SMD3YLR147C DSN1P40568 576 aa1.95□□□□□ -2.1
SMD3YLR147C KAP114P53067 1004 aa1.95□□□□□ -2.1
SMD3YLR147C PRS4P38063 326 aaPredicted RBP1.94□□□□□ -2.1
SMD3YLR147C DDI1P40087 428 aa1.94□□□□□ -2.1
SMD3YLR147C YBL008W-AQ3E821 79 aa1.94□□□□□ -2.1
SMD3YLR147C SMD3P43321 101 aaKnown RBP1.93□□□□□ -2.1
SMD3YLR147C YJR012CP47087 207 aa1.93□□□□□ -2.1
SMD3YLR147C OST6Q03723 332 aa1.93□□□□□ -2.1
SMD3YLR147C SSK22P25390 1331 aaPredicted RBP1.92□□□□□ -2.1
SMD3YLR147C COX2P00410 251 aa1.92□□□□□ -2.1
SMD3YLR147C HIS1P00498 297 aaKnown RBP1.92□□□□□ -2.1
SMD3YLR147C EHD3P28817 500 aa1.92□□□□□ -2.1
SMD3YLR147C RCN1P36054 211 aa1.92□□□□□ -2.1
SMD3YLR147C YFR054CP43622 192 aa1.92□□□□□ -2.1
SMD3YLR147C ASI3P53983 676 aa1.92□□□□□ -2.1
SMD3YLR147C SNF8Q12483 233 aa1.92□□□□□ -2.1
SMD3YLR147C YPL119C-AQ3E751 87 aa1.92□□□□□ -2.1
SMD3YLR147C PUT1P09368 476 aa1.91□□□□□ -2.1
SMD3YLR147C SEC22P22214 214 aa1.91□□□□□ -2.1
SMD3YLR147C QRI5P32344 111 aa1.91□□□□□ -2.1
SMD3YLR147C AYR1P40471 297 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms