RNA–Protein interactions for RNA: YLR106C

MDN1, Transcript of Huge dynein-related AAA-type ATPase (midasin), yeast

Gene MDN1, Length 14,733 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDN1	YLR106C	COX17	Q12287	69 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	ISN1	Q99312	450 aa		3.12	□□□□□ -1.91
MDN1	YLR106C	EHD3	P28817	500 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	QDR1	P40475	563 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	VPS73	P53142	486 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	VHT1	P53241	593 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	RPL20A	P0CX23	172 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	RPL20B	P0CX24	172 aa	Predicted RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	AIM46	P38885	310 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	YDL176W	Q12027	708 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	RLM1	Q12224	676 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	UTR1	P21373	530 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	COS9	P36034	407 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	SOK2	P53438	785 aa	Predicted RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	ATG21	Q02887	496 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	ACB1	P31787	87 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	CAT5	P41735	233 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	YGR210C	P42942	411 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	LSB3	P43603	459 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	YJR011C	P47086	261 aa	Predicted RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	PET191	Q02772	108 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	VBA1	Q04301	562 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	UTP30	P36144	274 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	MGE1	P38523	228 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	POP6	P53218	158 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	ACT1	P60010	375 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	RAD6	P06104	172 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	ARO3	P14843	370 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	DBF20	P32328	564 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	CLG1	P35190	452 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	RPL25	P04456	142 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	CNE1	P27825	502 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	CAM1	P29547	415 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	BSC5	P53755	489 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	YOR289W	Q12012	251 aa	Predicted RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	UBA3	Q99344	299 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	ARC40	P38328	384 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	REC102	Q02721	264 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	TY1A-DR2	Q03964	440 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	FRM2	P37261	193 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	YIR035C	P40579	254 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	BDS1	Q08347	646 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	TIR4	Q12218	487 aa	Predicted RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	DAL82	P21705	255 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	UMP1	P38293	148 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	ERV15	P38312	142 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	STS1	P38637	319 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	YMR254C	Q04838	102 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	REH1	Q06709	432 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	PET122	P10355	254 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	SSU72	P53538	206 aa	Predicted RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	FRS1	P15624	595 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	TIR2	P33890	251 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	SIT1	P39980	628 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	INP1	Q03694	420 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	NDE2	Q07500	545 aa		3.11	□□□□□ -1.91
MDN1	YLR106C	HAA1	Q12753	694 aa	Known RBP	3.11	□□□□□ -1.91
MDN1	YLR106C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
MDN1	YLR106C	ARG80	P07249	177 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	PFS1	P38872	237 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	SEC24	P40482	926 aa	Known RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	BNA7	Q04066	261 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	SKN7	P38889	622 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YIL077C	P40508	320 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	FMP48	P53233	369 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	MKC7	P53379	596 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	SSK1	Q07084	712 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	TRP4	P07285	380 aa	Predicted RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	YHL044W	P38727	235 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	BAP2	P38084	609 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	MIM1	Q08176	113 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	PIG2	P40187	538 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	IGO1	P53897	168 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	ISC10	P32645	267 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	MSS4	P38994	779 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	SEN34	P39707	275 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	PLB2	Q03674	706 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	HIS3	P06633	220 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	ADK1	P07170	222 aa	Known RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	CPR2	P23285	205 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	SDC1	Q03323	175 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	RPL17A	P05740	184 aa	Known RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	PGD1	P40356	397 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	SUN4	P53616	420 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	GPI15	P53961	229 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YKL097C	P34245	136 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YHK8	P38776	514 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YJL218W	P40892	196 aa	Known RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	STE18	P18852	110 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YGL204C	P53089	101 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	LPP1	Q04396	274 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	PMT6	P42934	759 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YGR042W	P53227	271 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	VBA4	Q04602	768 aa	Known RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	CTS2	Q06350	511 aa		3.1	□□□□□ -1.91
MDN1	YLR106C	YPR147C	Q06522	304 aa	Known RBP	3.1	□□□□□ -1.91
MDN1	YLR106C	IPP1	P00817	287 aa	Known RBP	3.09	□□□□□ -1.91
MDN1	YLR106C	ISU1	Q03020	165 aa		3.09	□□□□□ -1.91
MDN1	YLR106C	YDR415C	Q04033	374 aa	Predicted RBP	3.09	□□□□□ -1.91
MDN1	YLR106C	RPS13	P05756	151 aa	Known RBP	3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms